RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 TSC2P49815 1807 aa23.35■■□□□ 1.33
PTP4A3-204ENST00000521578 MYBL2P10244 700 aa23.34■■□□□ 1.33
PTP4A3-204ENST00000521578 CD58P19256 250 aa23.34■■□□□ 1.33
PTP4A3-204ENST00000521578 TBXAS1P24557 533 aaPredicted RBP23.34■■□□□ 1.33
PTP4A3-204ENST00000521578 OAS2P29728 719 aaKnown RBP23.34■■□□□ 1.33
PTP4A3-204ENST00000521578 GPC5P78333 572 aa23.34■■□□□ 1.33
PTP4A3-204ENST00000521578 SMYD5Q6GMV2 418 aa23.34■■□□□ 1.33
PTP4A3-204ENST00000521578 OSTM1Q86WC4 334 aa23.34■■□□□ 1.33
PTP4A3-204ENST00000521578 TMEM86AQ8N2M4 240 aa23.34■■□□□ 1.33
PTP4A3-204ENST00000521578 HCRTO43612 131 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 CYP11B1P15538 503 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 RPL17P18621 184 aaKnown RBP23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 CDR2Q01850 454 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 TERF2Q15554 542 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 PSMD5Q16401 504 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 ANKS3Q6ZW76 656 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 SLC47A2Q86VL8 602 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 PIK3R5Q8WYR1 880 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 FAXDC2Q96IV6 333 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 ACBD3Q9H3P7 528 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 TTC7AQ9ULT0 858 aaPredicted RBP23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 COG5Q9UP83 839 aa23.33■■□□□ 1.33
PTP4A3-204ENST00000521578 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 HIDE1A8MVS5 230 aa23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 CEP104O60308 925 aa23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 MTA2O94776 668 aa23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 OAZ2O95190 189 aa23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 FMO1Q01740 532 aa23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 MRPL58Q14197 206 aaKnown RBP23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 CTXN3Q4LDR2 81 aa23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 OR6B3Q8NGW1 331 aa23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 LMAN2LQ9H0V9 348 aa23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 NGRNQ9NPE2 291 aaKnown RBP23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 GDF3Q9NR23 364 aa23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 DDX43Q9NXZ2 648 aaKnown RBP23.33■■□□□ 1.32
PTP4A3-204ENST00000521578 PGRMC1O00264 195 aaKnown RBP23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 WARSP23381 471 aaKnown RBP23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 LMO2P25791 158 aa23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 GNL1P36915 607 aaPredicted RBP23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 SLC7A5Q01650 507 aa23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 ZNF280DQ6N043 979 aa23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 C11orf63Q6NUN7 778 aa23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 Q7L0L9 218 aa23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 DDX1Q92499 740 aaKnown RBP23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 RTP3Q9BQQ7 232 aa23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 SNX25Q9H3E2 840 aa23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 CYP3A43Q9HB55 503 aa23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 CISHQ9NSE2 258 aa23.32■■□□□ 1.32
PTP4A3-204ENST00000521578 H3BQF6 201 aa23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 GABRDO14764 452 aa23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 FSCN2O14926 492 aa23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 DDX3YO15523 660 aaKnown RBP23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 LILRB3O75022 631 aa23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 PDGFRBP09619 1106 aa23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 ACAT1P24752 427 aaKnown RBP23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 PTPROQ16827 1216 aa23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 RSPO2Q6UXX9 243 aaPredicted RBP23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 IFT20Q8IY31 132 aa23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 THEM5Q8N1Q8 247 aa23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 MRPL43Q8N983 215 aaKnown RBP23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 SSX2IPQ9Y2D8 614 aa23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 NME7Q9Y5B8 376 aa23.31■■□□□ 1.32
PTP4A3-204ENST00000521578 C2orf71A6NGG8 1288 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 H7C4K7 107 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 MMEP08473 750 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 LHX1P48742 406 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 PDE6CP51160 858 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 ORC1Q13415 861 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 OR10T2Q8NGX3 314 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 MRPL38Q96DV4 380 aaKnown RBP23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 MTRRQ9UBK8 725 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 HMGXB4Q9UGU5 601 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 CDY1Q9Y6F8 540 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 ATG2AQ2TAZ0 1938 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 A8MXQ7 604 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 ADAM12O43184 909 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 CNPP09543 421 aaKnown RBP23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 CDR1P51861 262 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 ARPP19P56211 112 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 TAF3Q5VWG9 929 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 TMEM209Q96SK2 561 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 KRT12Q99456 494 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 HPCAL4Q9UM19 191 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 BARX2Q9UMQ3 279 aaPredicted RBP23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 IRAK3Q9Y616 596 aa23.3■■□□□ 1.32
PTP4A3-204ENST00000521578 PRRC2BQ5JSZ5 2229 aaKnown RBP23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 CCDC188H7C350 402 aa23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 CYP1A2P05177 515 aa23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 GLI1P08151 1106 aa23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 FAM163BP0C2L3 166 aa23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 TNNT3P45378 269 aaPredicted RBP23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 NDST1P52848 882 aa23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 RNASE9P60153 205 aaKnown RBP23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 ZNF394Q53GI3 561 aa23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 PDE12Q6L8Q7 609 aaKnown RBP23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 GPR153Q6NV75 609 aa23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 EMBQ6PCB8 327 aa23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 SPATA18Q8TC71 538 aa23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 CLSTN3Q9BQT9 956 aa23.29■■□□□ 1.32
PTP4A3-204ENST00000521578 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms