RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 PSEN2P49810 448 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 PPP2R5DQ14738 602 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 CNGA2Q16280 664 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 KYAT1Q16773 422 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 FBXO47Q5MNV8 452 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 HHATQ5VTY9 493 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 FAM183BPQ6ZVS7 135 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 ANKS1BQ7Z6G8 1248 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 SIX6OS1Q8N1H7 587 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 TTC13Q8NBP0 860 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 CXCL16Q9H2A7 254 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 RNF39Q9H2S5 420 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 RAB6BQ9NRW1 208 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 NINJ2Q9NZG7 142 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 C17orf102A2RUQ5 167 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 AGTP01019 485 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 CA4P22748 312 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 KDELR1P24390 212 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 IL1R2P27930 398 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 VCPP55072 806 aaKnown RBP11.9□□□□□ -0.5
CLK4-206ENST00000520878 ROR1Q01973 937 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 PTK6Q13882 451 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 TFDP2Q14188 446 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 DCAF4L1Q3SXM0 396 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 CCHCR1Q8TD31 782 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 NDRG1Q92597 394 aaKnown RBP11.9□□□□□ -0.5
CLK4-206ENST00000520878 PTPRHQ9HD43 1115 aa11.9□□□□□ -0.5
CLK4-206ENST00000520878 EVPLQ92817 2033 aa11.9□□□□□ -0.51
CLK4-206ENST00000520878 hCG_1818297A0A087WSY0 165 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 A0A1B0GUA9 196 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 H0YGN5 161 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 RPS6KA5O75582 802 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 CREB1P16220 341 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 MOGSQ13724 837 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 ZNF268Q14587 947 aaPredicted RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 SIX1Q15475 284 aaPredicted RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 DCAF6Q58WW2 860 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 ANKRD23Q86SG2 305 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 FAM131BQ86XD5 332 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 XYLT1Q86Y38 959 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 CHMP6Q96FZ7 201 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 MS4A4AQ96JQ5 239 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 ZFP42Q96MM3 310 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 PTPN18Q99952 460 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 IQCGQ9H095 443 aaKnown RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 UBQLN1Q9UMX0 589 aaKnown RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 CHMP2BQ9UQN3 213 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 NFS1Q9Y697 457 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 PDE4DIPQ5VU43 2346 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 APRTP07741 180 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 GNAT1P11488 350 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 CPT1AP50416 773 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 ARL4CP56559 192 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 MAP2K5Q13163 448 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 ZC3H12AQ5D1E8 599 aaKnown RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 PMF1Q6P1K2 205 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 CEP128Q6ZU80 1094 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 ZNF410Q86VK4 478 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 SLC2A14Q8TDB8 520 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 HASPINQ8TF76 798 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 CNPY3Q9BT09 278 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 DPEP3Q9H4B8 488 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLK4-206ENST00000520878 MRPL42Q9Y6G3 142 aaKnown RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 NRCAMQ92823 1304 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 HMGCRP04035 888 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 RABGGTBP53611 331 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 AUHQ13825 339 aaKnown RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 CYP1B1Q16678 543 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 PIWIL1Q96J94 861 aaKnown RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 SMC6Q96SB8 1091 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 ALG13Q9NP73 1137 aaKnown RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 XPO7Q9UIA9 1087 aaKnown RBP11.89□□□□□ -0.51
CLK4-206ENST00000520878 ATAD5Q96QE3 1844 aa11.89□□□□□ -0.51
CLK4-206ENST00000520878 TCP11X1B4DZS4 312 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 NEBLO76041 1014 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 FAM107AO95990 144 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 SSTR1P30872 391 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 PTP4A2Q12974 167 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 RAB6CQ53S08 254 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 OLFML2BQ68BL8 750 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 C3orf62Q6ZUJ4 267 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 RSPH3Q86UC2 560 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 HACE1Q8IYU2 909 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 CCDC197Q8NCU1 140 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 ZMAT2Q96NC0 199 aaKnown RBP11.88□□□□□ -0.51
CLK4-206ENST00000520878 RAB6CQ9H0N0 254 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 NAALADL1Q9UQQ1 740 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 A0A087WUV0 522 aaPredicted RBP11.88□□□□□ -0.51
CLK4-206ENST00000520878 KPNA7A9QM74 516 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 PHBP35232 272 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 MSH2P43246 934 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 TAF6P49848 677 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 ZNF132P52740 706 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 ENPEPQ07075 957 aa11.88□□□□□ -0.51
CLK4-206ENST00000520878 FASTKD3Q14CZ7 662 aaKnown RBP11.88□□□□□ -0.51
CLK4-206ENST00000520878 FSCN1Q16658 493 aaKnown RBP11.88□□□□□ -0.51
CLK4-206ENST00000520878 FAM133BQ5BKY9 247 aaKnown RBP11.88□□□□□ -0.51
CLK4-206ENST00000520878 TTC16Q8NEE8 873 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms