RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 DMWDQ09019 674 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 NR1H3Q13133 447 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 ORC1Q13415 861 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 SIM2Q14190 667 aaPredicted RBP17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 ZNF77Q15935 545 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 RIN3Q8TB24 985 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 PLEKHO2Q8TD55 490 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 PARD3BQ8TEW8 1205 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 OSCP1Q8WVF1 389 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 ATP2A3Q93084 1043 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 TNIP3Q96KP6 325 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 FAM83CQ9BQN1 747 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 IMPG2Q9BZV3 1241 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 SMPD4Q9NXE4 827 aa17.18■□□□□ 0.34
IGHV3-42-201ENST00000520410 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 PDXKO00764 312 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 SCAMP3O14828 347 aaKnown RBP17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 LILRB5O75023 590 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 OBSL1O75147 1896 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 RNF40O75150 1001 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 EGFP01133 1207 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 MBL2P11226 248 aaPredicted RBP17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 NR2F2P24468 414 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 USP4Q13107 963 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 SRSF5Q13243 272 aaKnown RBP17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 LIMS2Q7Z4I7 341 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 FBXO32Q969P5 355 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 CHFRQ96EP1 664 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 C8orf48Q96LL4 319 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 P2RY13Q9BPV8 354 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 B3GNT5Q9BYG0 378 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 NACA2Q9H009 215 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 ECT2Q9H8V3 914 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 KIF26AQ9ULI4 1882 aaPredicted RBP17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 HPSEQ9Y251 543 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 ZDHHC9Q9Y397 364 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 NME7Q9Y5B8 376 aa17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 ZNF638Q14966 1978 aaKnown RBP17.17■□□□□ 0.34
IGHV3-42-201ENST00000520410 ATG13O75143 517 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 NFATC1O95644 943 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 STAU1O95793 577 aaKnown RBP17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 YWHAQP27348 245 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 GJA4P35212 333 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 PXNP49023 591 aaPredicted RBP17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 CACNA2D1P54289 1103 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 TAF10Q12962 218 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 CCINQ13939 588 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 BECN1Q14457 450 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 WDR44Q5JSH3 913 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 FSTL4Q6MZW2 842 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 KRBA2Q6ZNG9 492 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 ACOT1Q86TX2 421 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 FAM35AQ86V20 835 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 LONP2Q86WA8 852 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 SYNPOQ8N3V7 929 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 CCDC150Q8NCX0 1101 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 CD101Q93033 1021 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 JAKMIP2Q96AA8 810 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 GZF1Q9H116 711 aaPredicted RBP17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 XYLT2Q9H1B5 865 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 KCTD10Q9H3F6 313 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 KRT82Q9NSB4 513 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 CPQQ9Y646 472 aa17.16■□□□□ 0.34
IGHV3-42-201ENST00000520410 OTOL1A6NHN0 477 aaPredicted RBP17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 LEFTY2O00292 366 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 AP1G2O75843 785 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 RTN3O95197 1032 aaPredicted RBP17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 C4BPAP04003 597 aaKnown RBP17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 TRIM49P0CI25 452 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 TRIM49CP0CI26 452 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 CCDC192P0DO97 292 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 CCDC130P13994 396 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 GALK1P51570 392 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 VAMP7P51809 220 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 SPEM2Q0P670 501 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 SGSM1Q2NKQ1 1148 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 TMEM196Q5HYL7 178 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 NAIF1Q69YI7 327 aaPredicted RBP17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 SPOPLQ6IQ16 392 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 SLC9A9Q8IVB4 645 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 NUP93Q8N1F7 819 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 RMDN1Q96DB5 314 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 SMARCD1Q96GM5 515 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 CEP295NLQ96MC4 621 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 GOLPH3LQ9H4A5 285 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 DMAP1Q9NPF5 467 aaPredicted RBP17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 FAM49BQ9NUQ9 324 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 C2orf42Q9NWW7 574 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 ARHGAP26Q9UNA1 814 aa17.15■□□□□ 0.34
IGHV3-42-201ENST00000520410 VNN1O95497 513 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 HLA-DRAP01903 254 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 FAM163BP0C2L3 166 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 TDGF1P13385 188 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 DRD1P21728 446 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 RPL13P26373 211 aaKnown RBP17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 ADORA2BP29275 332 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 PPP3CCP48454 512 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 SEC13P55735 322 aa17.14■□□□□ 0.33
IGHV3-42-201ENST00000520410 NOP14P78316 857 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms