RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 FTSJ3Q8IY81 847 aaKnown RBP6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 PPHLN1Q8NEY8 458 aaKnown RBP6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 PPP2R3CQ969Q6 453 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 FAM89AQ96GI7 184 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 OSBPL9Q96SU4 736 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 EIF2AK1Q9BQI3 630 aaKnown RBP6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 NUDT22Q9BRQ3 303 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 MLXIPQ9HAP2 919 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 VPS51Q9UID3 782 aa6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 NDRG4Q9ULP0 352 aaKnown RBP6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P46-201ENST00000520062 J3KRW8 73 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 GPR42O15529 346 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 ANXA6P08133 673 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 NDUFV1P49821 464 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 RNASE9P60153 205 aaKnown RBP6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 RPS7P62081 194 aaKnown RBP6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 HSD11B2P80365 405 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 MC2RQ01718 297 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 DDX10Q13206 875 aaKnown RBP6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 CCNIQ14094 377 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 TRIM60Q495X7 471 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 ANKRD45Q5TZF3 282 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 ABLIM2Q6H8Q1 611 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 MAMDC4Q6UXC1 1216 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 RINLQ6ZS11 566 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 MICALCLQ6ZW33 695 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 MAPKAPK5Q8IW41 473 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 SLC15A3Q8IY34 581 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 SYT8Q8NBV8 401 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 MBD3L2Q8NHZ7 208 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 DNAJB14Q8TBM8 379 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 ABHD5Q8WTS1 349 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 UNC45AQ9H3U1 944 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 ZHX3Q9H4I2 956 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 LPAR3Q9UBY5 353 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 EIF2B4Q9UI10 523 aaKnown RBP6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 SLC13A4Q9UKG4 626 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 TMEM98Q9Y2Y6 226 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 AATKQ6ZMQ8 1374 aa6.14□□□□□ -1.43
HMGB1P46-201ENST00000520062 CCDC78A2IDD5 438 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 PATE3B3GLJ2 98 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 hCG_1984214I3L0E3 225 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 EYA2O00167 538 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 TRIAP1O43715 76 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 ERN1O75460 977 aaKnown RBP6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 RECQL4O94761 1208 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 USP1O94782 785 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 SRGAP2BP0DMP2 458 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 PRKAR1BP31321 381 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 BCAT1P54687 386 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 TIAL1Q01085 375 aaKnown RBP eCLIP6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 LMOD3Q0VAK6 560 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 SCAPQ12770 1279 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 SIM2Q14190 667 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 FAM110CQ1W6H9 321 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 PDCD4Q53EL6 469 aaKnown RBP6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 ARHGAP40Q5TG30 622 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 ICE2Q659A1 982 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 LRRC55Q6ZSA7 311 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 RAB11FIP2Q7L804 512 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 GDF7Q7Z4P5 450 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 C2CD5Q86YS7 1000 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 HERC6Q8IVU3 1022 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 LRRC56Q8IYG6 542 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 FAM109AQ8N4B1 249 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 OR1N1Q8NGS0 311 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 SLC30A5Q8TAD4 765 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 HERVK_113Q902F9 699 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 SKA1Q96BD8 255 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 GRAMD1AQ96CP6 724 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 FMNL2Q96PY5 1086 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 ZSWIM1Q9BR11 485 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 TWSG1Q9GZX9 223 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 SEPSECSQ9HD40 501 aaKnown RBP6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 WASH6PQ9NQA3 447 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 MRPS17Q9Y2R5 130 aaKnown RBP6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 CRYL1Q9Y2S2 319 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 FPGT-TNNI3KV9GXZ4 949 aa6.13□□□□□ -1.43
HMGB1P46-201ENST00000520062 GAGE12BA1L429 117 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 GAGE12HA6NDE8 117 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 MYADML2A6NDP7 307 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 HMX3A6NHT5 357 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 ZNF185O15231 689 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 DHHO43323 396 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 DNPH1O43598 174 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 CFIP05156 583 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 CSF1RP07333 972 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 CKMT1AP12532 417 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 CD6P30203 668 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 ZEB1P37275 1124 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 CASP2P42575 452 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 NPTX2P47972 431 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 XDHP47989 1333 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 CDK7P50613 346 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 PDE6CP51160 858 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 TLE2Q04725 743 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 PTCHD3Q3KNS1 767 aa6.12□□□□□ -1.43
HMGB1P46-201ENST00000520062 PREPLQ4J6C6 727 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms