RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 SCN4BQ8IWT1 228 aa12.6□□□□□ -0.39
POLB-208ENST00000520008 KIAA1958Q8N8K9 716 aa12.6□□□□□ -0.39
POLB-208ENST00000520008 MYCBPAPQ8TBZ2 947 aa12.6□□□□□ -0.39
POLB-208ENST00000520008 NOC3LQ8WTT2 800 aaKnown RBP12.6□□□□□ -0.39
POLB-208ENST00000520008 DUSP15Q9H1R2 295 aaPredicted RBP12.6□□□□□ -0.39
POLB-208ENST00000520008 LINC00597Q9H2U6 94 aa12.6□□□□□ -0.39
POLB-208ENST00000520008 CUEDC2Q9H467 287 aa12.6□□□□□ -0.39
POLB-208ENST00000520008 KIAA1586Q9HCI6 787 aa12.6□□□□□ -0.39
POLB-208ENST00000520008 TMEM30AQ9NV96 361 aa12.6□□□□□ -0.39
POLB-208ENST00000520008 MAGEC2Q9UBF1 373 aaPredicted RBP12.6□□□□□ -0.39
POLB-208ENST00000520008 MAP1BP46821 2468 aaKnown RBP12.59□□□□□ -0.39
POLB-208ENST00000520008 STX6O43752 255 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 STAU1O95793 577 aaKnown RBP12.59□□□□□ -0.39
POLB-208ENST00000520008 OAS1P00973 400 aaKnown RBP12.59□□□□□ -0.39
POLB-208ENST00000520008 CST3P01034 146 aaPredicted RBP12.59□□□□□ -0.39
POLB-208ENST00000520008 CCDC192P0DO97 292 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 HDCP19113 662 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 BDNFP23560 247 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 MPLP40238 635 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 PDE6CP51160 858 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 CACNA2D1P54289 1103 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 SLC7A9P82251 487 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 DMC1Q14565 340 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 CCDC6Q16204 474 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 SNRNP35Q16560 246 aaKnown RBP12.59□□□□□ -0.39
POLB-208ENST00000520008 SCFD1Q8WVM8 642 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 DDX1Q92499 740 aaKnown RBP12.59□□□□□ -0.39
POLB-208ENST00000520008 EXOC4Q96A65 974 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 ACDQ96AP0 544 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 C8orf48Q96LL4 319 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 CGRRF1Q99675 332 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 MRPL45Q9BRJ2 306 aaKnown RBP12.59□□□□□ -0.39
POLB-208ENST00000520008 AGPAT3Q9NRZ7 376 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 USP24Q9UPU5 2620 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 UBE4BO95155 1302 aa12.59□□□□□ -0.39
POLB-208ENST00000520008 LAMA1P25391 3075 aa12.58□□□□□ -0.39
POLB-208ENST00000520008 ZNF840PA6NDX5 716 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 ANTXRLA6NF34 631 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 F8VP50 259 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 K7EQS6 105 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 LEFTY2O00292 366 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 TRIM66O15016 1216 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 SPTLC2O15270 562 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 NFATC1O95644 943 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 APBB3O95704 486 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 FAM163BP0C2L3 166 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 GRIK1P39086 918 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 CYP27A1Q02318 531 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 CYP24A1Q07973 514 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 PSMD6Q15008 389 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 STK38Q15208 465 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 BMT2Q1RMZ1 405 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 AASDHQ4L235 1098 aaPredicted RBP12.58□□□□□ -0.4
POLB-208ENST00000520008 FAM26FQ5R3K3 315 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 SHC4Q6S5L8 630 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 RASSF3Q86WH2 238 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 USP33Q8TEY7 942 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 C7orf25Q9BPX7 421 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 LRRC27Q9C0I9 530 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 RNF38Q9H0F5 515 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 XYLT2Q9H1B5 865 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 SMOC1Q9H4F8 434 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 TRPM5Q9NZQ8 1165 aa12.58□□□□□ -0.4
POLB-208ENST00000520008 SDK1Q7Z5N4 2213 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 TULP1O00294 542 aaPredicted RBP12.57□□□□□ -0.4
POLB-208ENST00000520008 DCLK1O15075 740 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 YEATS4O95619 227 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 CYP17A1P05093 508 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 PDGFRBP09619 1106 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 DLATP10515 647 aaKnown RBP12.57□□□□□ -0.4
POLB-208ENST00000520008 ANXA13P27216 316 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 PMLP29590 882 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 PPP3CCP48454 512 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 SNRPFP62306 86 aaKnown RBP12.57□□□□□ -0.4
POLB-208ENST00000520008 NR1H3Q13133 447 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 MDH1BQ5I0G3 518 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 UNC13DQ70J99 1090 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 C12orf56Q8IXR9 622 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 ADGRG2Q8IZP9 1017 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 C12orf50Q8NA57 414 aaPredicted RBP12.57□□□□□ -0.4
POLB-208ENST00000520008 ZNF516Q92618 1163 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 DHX58Q96C10 678 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 MMS19Q96T76 1030 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 DPEP3Q9H4B8 488 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 VRTNQ9H8Y1 702 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 VPS45Q9NRW7 570 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 EHD2Q9NZN4 543 aa12.57□□□□□ -0.4
POLB-208ENST00000520008 R3HCC1Q9Y3T6 440 aaKnown RBP12.57□□□□□ -0.4
POLB-208ENST00000520008 TNRC6BQ9UPQ9 1833 aaKnown RBP12.57□□□□□ -0.4
POLB-208ENST00000520008 CNOT1A5YKK6 2376 aaKnown RBP12.57□□□□□ -0.4
POLB-208ENST00000520008 ASPMQ8IZT6 3477 aa12.56□□□□□ -0.4
POLB-208ENST00000520008 NUP205Q92621 2012 aa12.56□□□□□ -0.4
POLB-208ENST00000520008 K7ELQ4 463 aaPredicted RBP12.56□□□□□ -0.4
POLB-208ENST00000520008 KRT37O76014 449 aa12.56□□□□□ -0.4
POLB-208ENST00000520008 PTPN1P18031 435 aaKnown RBP12.56□□□□□ -0.4
POLB-208ENST00000520008 TNNI1P19237 187 aa12.56□□□□□ -0.4
POLB-208ENST00000520008 GNL1P36915 607 aaPredicted RBP12.56□□□□□ -0.4
POLB-208ENST00000520008 ASIC1P78348 528 aa12.56□□□□□ -0.4
POLB-208ENST00000520008 AMPD3Q01432 767 aa12.56□□□□□ -0.4
POLB-208ENST00000520008 MESP2Q0VG99 397 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms