RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 RNF149Q8NC42 400 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 TRIM9Q9C026 710 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 RRN3Q9NYV6 651 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 FBXO40Q9UH90 709 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 NEU2Q9Y3R4 380 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 C11orf88Q6PI97 169 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 HAUS6Q7Z4H7 955 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 DCUN1D1Q96GG9 259 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 FMO5P49326 533 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 NFIL3Q16649 462 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 L1RE1Q9UN81 338 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 PRLP01236 227 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 SERPIND1P05546 499 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 RGS7P49802 495 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 WDR72Q3MJ13 1102 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 SYDE1Q6ZW31 735 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-206ENST00000520002 RRM2BQ7LG56 351 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 STK33Q9BYT3 514 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 HOXC10Q9NYD6 342 aa9.02□□□□□ -0.97
CSMD1-206ENST00000520002 CLTCQ00610 1675 aaKnown RBP9.01□□□□□ -0.97
CSMD1-206ENST00000520002 NCKAP1LP55160 1127 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 ABCE1P61221 599 aaKnown RBP9.01□□□□□ -0.97
CSMD1-206ENST00000520002 PCSK7Q16549 785 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 SGO1Q5FBB7 561 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 TTC39CQ8N584 583 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 TMEM143Q96AN5 459 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 ZNF556Q9HAH1 456 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 GALNT8Q9NY28 637 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 ATP6V1HQ9UI12 483 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 EFCAB14O75071 495 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 ZNF200P98182 395 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-206ENST00000520002 E2F7Q96AV8 911 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 PIF1Q9H611 641 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 A8MUI8 341 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 PID1Q7Z2X4 250 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 PTPRN2Q92932 1015 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 TSPAN18Q96SJ8 248 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 PHACTR1Q9C0D0 580 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 ACAD9Q9H845 621 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 COPG2Q9UBF2 871 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 GSG1L2A8MUP6 293 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 TRIM49D1C9J1S8 452 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 AKT1P31749 480 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 NNMTP40261 264 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 NCOA4Q13772 614 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 SYTL3Q4VX76 610 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 DEFB107AQ8IZN7 70 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 USP38Q8NB14 1042 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 SPATA18Q8TC71 538 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 REREQ9P2R6 1566 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 ZNF609O15014 1411 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 FAM25AB3EWG3 89 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 FAM25CB3EWG5 89 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 FAM25GB3EWG6 89 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 RGS2P41220 211 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 KLHL12Q53G59 568 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 GATAD2AQ86YP4 633 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 SNX31Q8N9S9 440 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 C18orf8Q96DM3 657 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 RPRD1BQ9NQG5 326 aaKnown RBP9.01□□□□□ -0.97
CSMD1-206ENST00000520002 RAB6BQ9NRW1 208 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 IMPAD1Q9NX62 359 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 FARP1Q9Y4F1 1045 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-206ENST00000520002 E9PBE3 544 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 STK25O00506 426 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 PPP3CCP48454 512 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 RNF220Q5VTB9 566 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 MYRFQ9Y2G1 1151 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 RNF17Q9BXT8 1623 aaKnown RBP9.01□□□□□ -0.97
CSMD1-206ENST00000520002 PGM3O95394 542 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 P4HBP07237 508 aaKnown RBP9.01□□□□□ -0.97
CSMD1-206ENST00000520002 BGNP21810 368 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 SLC1A1P43005 524 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 GSSP48637 474 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 SNRNP35Q16560 246 aaKnown RBP9.01□□□□□ -0.97
CSMD1-206ENST00000520002 TSPAN17Q96FV3 270 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 LATS2Q9NRM7 1088 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 CARD8Q9Y2G2 431 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 FAM32AQ9Y421 112 aaKnown RBP9.01□□□□□ -0.97
CSMD1-206ENST00000520002 USP11P51784 963 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 ADAM17P78536 824 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 MROH9Q5TGP6 573 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 AKAP14Q86UN6 197 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 CYP39A1Q9NYL5 469 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 MYO3AQ8NEV4 1616 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 ABCC3O15438 1527 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 WEE2P0C1S8 567 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 SRBD1Q8N5C6 995 aaKnown RBP9.01□□□□□ -0.97
CSMD1-206ENST00000520002 CTNNAL1Q9UBT7 734 aa9.01□□□□□ -0.97
CSMD1-206ENST00000520002 C3orf70A6NLC5 250 aaPredicted RBP9□□□□□ -0.97
CSMD1-206ENST00000520002 FKBP9O95302 570 aa9□□□□□ -0.97
CSMD1-206ENST00000520002 CSE1LP55060 971 aaKnown RBP9□□□□□ -0.97
CSMD1-206ENST00000520002 MTMR2Q13614 643 aa9□□□□□ -0.97
CSMD1-206ENST00000520002 ALX1Q15699 326 aa9□□□□□ -0.97
CSMD1-206ENST00000520002 FKBP9P1Q75LS8 142 aa9□□□□□ -0.97
CSMD1-206ENST00000520002 NECAB2Q7Z6G3 386 aa9□□□□□ -0.97
CSMD1-206ENST00000520002 POU5F2Q8N7G0 328 aa9□□□□□ -0.97
CSMD1-206ENST00000520002 ATP8B4Q8TF62 1192 aa9□□□□□ -0.97
CSMD1-206ENST00000520002 ITFG2Q969R8 447 aa9□□□□□ -0.97
CSMD1-206ENST00000520002 NRDE2Q9H7Z3 1164 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms