RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 WNT16Q9UBV4 365 aa12.23□□□□□ -0.45
SPIDR-212ENST00000519661 APEX2Q9UBZ4 518 aa12.23□□□□□ -0.45
SPIDR-212ENST00000519661 USP3Q9Y6I4 520 aa12.23□□□□□ -0.45
SPIDR-212ENST00000519661 NUMBLQ9Y6R0 609 aa12.23□□□□□ -0.45
SPIDR-212ENST00000519661 GREB1Q4ZG55 1949 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 A0A1W2PRU2 124 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 PRR33A8MZF0 331 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 KCNJ18B7U540 433 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 O00370 1275 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 NPR3P17342 541 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 PON1P27169 355 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 RPL34P49207 117 aaKnown RBP12.22□□□□□ -0.45
SPIDR-212ENST00000519661 USP46P62068 366 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 CYP27A1Q02318 531 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 KCNJ12Q14500 433 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 STILQ15468 1287 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 TEAD2Q15562 447 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 EXOC3L4Q17RC7 722 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 VWA3BQ502W6 1294 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 RAB41Q5JT25 222 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 GBP6Q6ZN66 633 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 NUP93Q8N1F7 819 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 ANKRD52Q8NB46 1076 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 PDZD8Q8NEN9 1154 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 FAM200AQ8TCP9 573 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 SHC3Q92529 594 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 DNASE1L2Q92874 299 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 CYFIP2Q96F07 1278 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 DUSP16Q9BY84 665 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 EPHX3Q9H6B9 360 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 MMRN2Q9H8L6 949 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 KIF9Q9HAQ2 790 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 PLCB1Q9NQ66 1216 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 KRT82Q9NSB4 513 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 LIMA1Q9UHB6 759 aaKnown RBP12.22□□□□□ -0.45
SPIDR-212ENST00000519661 KIF26AQ9ULI4 1882 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-212ENST00000519661 PATJQ8NI35 1801 aa12.22□□□□□ -0.45
SPIDR-212ENST00000519661 ZNF840PA6NDX5 716 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 CLDN5O00501 218 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 OAS1P00973 400 aaKnown RBP12.21□□□□□ -0.45
SPIDR-212ENST00000519661 ASGR2P07307 311 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 FAM200BP0CF97 657 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 VDRP11473 427 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 MYL4P12829 197 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 CCDC130P13994 396 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 ANXA13P27216 316 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 GRIK1P39086 918 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 PDE6CP51160 858 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 ARHGAP15Q53QZ3 475 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 CAVIN1Q6NZI2 390 aaKnown RBP12.21□□□□□ -0.45
SPIDR-212ENST00000519661 KLHDC10Q6PID8 442 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 LCLAT1Q6UWP7 414 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 ARHGEF19Q8IW93 802 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 MFSD6LQ8IWD5 586 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 CMTM8Q8IZV2 173 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 ZSCAN18Q8TBC5 510 aaPredicted RBP12.21□□□□□ -0.45
SPIDR-212ENST00000519661 KCNK16Q96T55 309 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 DDX23Q9BUQ8 820 aaKnown RBP12.21□□□□□ -0.45
SPIDR-212ENST00000519661 NAA15Q9BXJ9 866 aaKnown RBP12.21□□□□□ -0.45
SPIDR-212ENST00000519661 SLC46A2Q9BY10 475 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 NAT10Q9H0A0 1025 aaKnown RBP12.21□□□□□ -0.45
SPIDR-212ENST00000519661 FBXO44Q9H4M3 255 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 ZFP14Q9HCL3 533 aa12.21□□□□□ -0.45
SPIDR-212ENST00000519661 ZDBF2Q9HCK1 2354 aa12.21□□□□□ -0.46
SPIDR-212ENST00000519661 DENND4CQ5VZ89 1909 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 AP1G2O75843 785 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 BEST1O76090 585 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 SETSIPP0DME0 302 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 PSMC3P17980 439 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 CD58P19256 250 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 MTIF2P46199 727 aaKnown RBP12.2□□□□□ -0.46
SPIDR-212ENST00000519661 PLA2G4AP47712 749 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 KIF11P52732 1056 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 SLC5A3P53794 718 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 SLC7A9P82251 487 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 KCNMA1Q12791 1236 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 KRT31Q15323 416 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 CNGA2Q16280 664 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 TPD52L1Q16890 204 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-212ENST00000519661 PPP1R26Q5T8A7 1209 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-212ENST00000519661 TANGO2Q6ICL3 276 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 CCDC186Q7Z3E2 898 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 ARID3BQ8IVW6 561 aaPredicted RBP12.2□□□□□ -0.46
SPIDR-212ENST00000519661 SCN4BQ8IWT1 228 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 PPM1KQ8N3J5 372 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 GPR152Q8TDT2 470 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 GIPC2Q8TF65 315 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 STK32AQ8WU08 396 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 RSAD2Q8WXG1 361 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 ING5Q8WYH8 240 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 KCTD13Q8WZ19 329 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 MRPS31Q92665 395 aaKnown RBP12.2□□□□□ -0.46
SPIDR-212ENST00000519661 KAT5Q92993 513 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 RSPRY1Q96DX4 576 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 MCRS1Q96EZ8 462 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 GCNAQ96QF7 691 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 ZSWIM1Q9BR11 485 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 RPP25Q9BUL9 199 aaKnown RBP12.2□□□□□ -0.46
SPIDR-212ENST00000519661 ATXN3LQ9H3M9 355 aa12.2□□□□□ -0.46
SPIDR-212ENST00000519661 CYLDQ9NQC7 956 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms