RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 HDXQ7Z353 690 aa24.56■■□□□ 1.52
SLIT3-204ENST00000518140 CCDC50Q8IVM0 306 aa24.56■■□□□ 1.52
SLIT3-204ENST00000518140 SYT15Q9BQS2 421 aa24.56■■□□□ 1.52
SLIT3-204ENST00000518140 SLITRK6Q9H5Y7 841 aa24.56■■□□□ 1.52
SLIT3-204ENST00000518140 TDRD15B5MCY1 1934 aaKnown RBP24.56■■□□□ 1.52
SLIT3-204ENST00000518140 C2CD4BA6NLJ0 364 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 HSPA6P17066 643 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 CCL23P55773 120 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 SLC6A3Q01959 620 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 NOMO2Q5JPE7 1267 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 EXD1Q8NHP7 514 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 RAPGEF5Q92565 580 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 MAGOHBQ96A72 148 aaKnown RBP24.55■■□□□ 1.52
SLIT3-204ENST00000518140 FTHL17Q9BXU8 183 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 GOLGA6L10A0A0M3HER8 536 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 PITPNM1O00562 1244 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 PDGFRAP16234 1089 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 MCM3P25205 808 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 GATMP50440 423 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 SLC25A11Q02978 314 aaKnown RBP24.55■■□□□ 1.52
SLIT3-204ENST00000518140 ADCY2Q08462 1091 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 CLUL1Q15846 466 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 C15orf59Q2T9L4 293 aaPredicted RBP24.55■■□□□ 1.52
SLIT3-204ENST00000518140 DIS3LQ8TF46 1054 aaKnown RBP24.55■■□□□ 1.52
SLIT3-204ENST00000518140 IFT81Q8WYA0 676 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 RSPH1Q8WYR4 309 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 NDRG1Q92597 394 aaKnown RBP24.55■■□□□ 1.52
SLIT3-204ENST00000518140 ZBTB9Q96C00 473 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 DUSP16Q9BY84 665 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 ZWILCHQ9H900 591 aa24.55■■□□□ 1.52
SLIT3-204ENST00000518140 RPL34P49207 117 aaKnown RBP24.54■■□□□ 1.52
SLIT3-204ENST00000518140 FAAP100Q0VG06 881 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 GPS2Q13227 327 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 SMTNL2Q2TAL5 461 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 KCNT1Q5JUK3 1230 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 LRRC38Q5VT99 294 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 DCLRE1AQ6PJP8 1040 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 PIGZQ86VD9 579 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 DDX42Q86XP3 938 aaKnown RBP eCLIP24.54■■□□□ 1.52
SLIT3-204ENST00000518140 C1orf54Q8WWF1 131 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 TMEM30AQ9NV96 361 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 TBC1D13Q9NVG8 400 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 DNAJB4Q9UDY4 337 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 PCSK1NQ9UHG2 260 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 LCMT1Q9UIC8 334 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.54■■□□□ 1.52
SLIT3-204ENST00000518140 PHF2O75151 1096 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 ZNF143P52747 638 aaPredicted RBP24.54■■□□□ 1.52
SLIT3-204ENST00000518140 TLE2Q04725 743 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 DSC1Q08554 894 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 ZFYVE27Q5T4F4 411 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 MFSD7Q6UXD7 560 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 IFT20Q8IY31 132 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 PCED1BQ96HM7 432 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 CFAP57Q96MR6 1250 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 TRIM51Q9BSJ1 452 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 MED10Q9BTT4 135 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 PLVAPQ9BX97 442 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 PPP1R12CQ9BZL4 782 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 CRISPLD2Q9H0B8 497 aa24.54■■□□□ 1.52
SLIT3-204ENST00000518140 R3HDM2Q9Y2K5 976 aaKnown RBP24.54■■□□□ 1.52
SLIT3-204ENST00000518140 BHMG1C9JSJ3 638 aaPredicted RBP24.53■■□□□ 1.52
SLIT3-204ENST00000518140 M0QZQ0 153 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 KRT1P04264 644 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 ODC1P11926 461 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 KRT10P13645 584 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 GPD1P21695 349 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 MIPP30301 263 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 KCNJ1P48048 391 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 CACNA2D1P54289 1103 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 TRIM60Q495X7 471 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 CCDC14Q49A88 953 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 COLGALT2Q8IYK4 626 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 CCDC26Q8TAB7 109 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 UROC1Q96N76 676 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 SLITRK1Q96PX8 696 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 OSBPL8Q9BZF1 889 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 TMEM161AQ9NX61 479 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 NFU1Q9UMS0 254 aa24.53■■□□□ 1.52
SLIT3-204ENST00000518140 CYP2C18P33260 490 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 PTGIRP43119 386 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 KLF1Q13351 362 aaPredicted RBP24.52■■□□□ 1.52
SLIT3-204ENST00000518140 CYP1B1Q16678 543 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 CLEC20AQ6ZU45 233 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 ANKRD33Q7Z3H0 272 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 RCOR2Q8IZ40 523 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 AENQ8WTP8 325 aaKnown RBP24.52■■□□□ 1.52
SLIT3-204ENST00000518140 ATG4AQ8WYN0 398 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 RUBCNQ92622 972 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 TMEM209Q96SK2 561 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 RHOBTB2Q9BYZ6 727 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 DNAI2Q9GZS0 605 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 HIPK3Q9H422 1215 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 MTUS1Q9ULD2 1270 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 XPO1O14980 1071 aaKnown RBP24.52■■□□□ 1.52
SLIT3-204ENST00000518140 NPR3P17342 541 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 MAP3K7CLP57077 242 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 MAATS1Q7Z4T9 603 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 FAM118BQ9BPY3 351 aa24.52■■□□□ 1.52
SLIT3-204ENST00000518140 CNPY3Q9BT09 278 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms