RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 PDGFRLQ15198 375 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 SGSM1Q2NKQ1 1148 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 ZNF528Q3MIS6 628 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 ZACNQ401N2 412 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 DGKKQ5KSL6 1271 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 INTS8Q75QN2 995 aaKnown RBP11.25□□□□□ -0.61
SPIDR-205ENST00000518060 SV2AQ7L0J3 742 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 ACOT1Q86TX2 421 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 FAM35AQ86V20 835 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 GUF1Q8N442 669 aaKnown RBP11.25□□□□□ -0.61
SPIDR-205ENST00000518060 CPA6Q8N4T0 437 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 SH3RF2Q8TEC5 729 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 FBXO32Q969P5 355 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 C8orf48Q96LL4 319 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 SLITRK1Q96PX8 696 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 SLC22A12Q96S37 553 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 IER2Q9BTL4 223 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 SDCBP2Q9H190 292 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 HPS4Q9NQG7 708 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 PRMT8Q9NR22 394 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-205ENST00000518060 KRT82Q9NSB4 513 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 FAM49BQ9NUQ9 324 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 ZSCAN32Q9NX65 697 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 DUS2Q9NX74 493 aaKnown RBP11.25□□□□□ -0.61
SPIDR-205ENST00000518060 SMPD4Q9NXE4 827 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 NCDNQ9UBB6 729 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 TRAF3IP3Q9Y228 551 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 PCDHGA2Q9Y5H1 932 aa11.25□□□□□ -0.61
SPIDR-205ENST00000518060 SOBPA7XYQ1 873 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 AP1G2O75843 785 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 SMC2O95347 1197 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 FAM163BP0C2L3 166 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 EPB41P11171 864 aaKnown RBP11.24□□□□□ -0.61
SPIDR-205ENST00000518060 CCDC130P13994 396 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 CD58P19256 250 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 YWHAQP27348 245 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 PSMC2P35998 433 aaKnown RBP11.24□□□□□ -0.61
SPIDR-205ENST00000518060 CXCL12P48061 93 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 NDST1P52848 882 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 MLLT6P55198 1093 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-205ENST00000518060 CLDN10P78369 228 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 AMPD2Q01433 879 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 SATB1Q01826 763 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 GRSF1Q12849 480 aaKnown RBP eCLIP11.24□□□□□ -0.61
SPIDR-205ENST00000518060 TAF10Q12962 218 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 FZD5Q13467 585 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 ZNF268Q14587 947 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-205ENST00000518060 DCAF17Q5H9S7 520 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-205ENST00000518060 HEATR6Q6AI08 1181 aaKnown RBP11.24□□□□□ -0.61
SPIDR-205ENST00000518060 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 RIN3Q8TB24 985 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 TAF4BQ92750 862 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 ERCC4Q92889 916 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-205ENST00000518060 JAKMIP2Q96AA8 810 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 EEF2KMTQ96G04 330 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 SMARCD1Q96GM5 515 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 CEP295NLQ96MC4 621 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 TSG101Q99816 390 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 FAM83CQ9BQN1 747 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 NACA2Q9H009 215 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 VRTNQ9H8Y1 702 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 DMAP1Q9NPF5 467 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-205ENST00000518060 HMGXB4Q9UGU5 601 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 HOOK1Q9UJC3 728 aaKnown RBP11.24□□□□□ -0.61
SPIDR-205ENST00000518060 GVINP1Q7Z2Y8 2422 aa11.24□□□□□ -0.61
SPIDR-205ENST00000518060 COL4A2P08572 1712 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 NUP210Q8TEM1 1887 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-205ENST00000518060 FAM186AA6NE01 2351 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 ZNF840PA6NDX5 716 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 SCAMP3O14828 347 aaKnown RBP11.23□□□□□ -0.61
SPIDR-205ENST00000518060 IKBKBO14920 756 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 RTN3O95197 1032 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-205ENST00000518060 ASS1P00966 412 aaKnown RBP11.23□□□□□ -0.61
SPIDR-205ENST00000518060 MBL2P11226 248 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-205ENST00000518060 ADORA2BP29275 332 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 ASPAP45381 313 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 SLC5A3P53794 718 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 NRLP54845 237 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 NOP14P78316 857 aaKnown RBP11.23□□□□□ -0.61
SPIDR-205ENST00000518060 USP4Q13107 963 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 ZNF77Q15935 545 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 LPAL2Q16609 132 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 TCERG1LQ5VWI1 586 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 PRR23BQ6ZRT6 265 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 KIAA2013Q8IYS2 634 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 FMR1NBQ8N0W7 255 aaPredicted RBP11.23□□□□□ -0.61
SPIDR-205ENST00000518060 NUP93Q8N1F7 819 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 SPEM1Q8N4L4 309 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 SLC2A14Q8TDB8 520 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 TAS1R2Q8TE23 839 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 OSCP1Q8WVF1 389 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 SECISBP2LQ93073 1101 aaKnown RBP11.23□□□□□ -0.61
SPIDR-205ENST00000518060 ATP2A3Q93084 1043 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 SMARCE1Q969G3 411 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 EXOC4Q96A65 974 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 KCNK16Q96T55 309 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 TMEM30AQ9NV96 361 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 GCNT4Q9P109 453 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 RAB23Q9ULC3 237 aa11.23□□□□□ -0.61
SPIDR-205ENST00000518060 ARHGAP26Q9UNA1 814 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms