RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TJP2Q9UDY2 1190 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 NENFQ9UMX5 172 aa10.47□□□□□ -0.73
CLN8-202ENST00000517514 FAM170AA1A519 330 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 M0QYV0 167 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 CYP1A1P04798 512 aaPredicted RBP10.46□□□□□ -0.73
CLN8-202ENST00000517514 FAM200BP0CF97 657 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 UNGP13051 313 aaPredicted RBP10.46□□□□□ -0.73
CLN8-202ENST00000517514 HMGA1P17096 107 aaKnown RBP10.46□□□□□ -0.73
CLN8-202ENST00000517514 NPR3P17342 541 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 PGFP49763 221 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 MAP3K7CLP57077 242 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 BPIFB4P59827 614 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 NOMO3P69849 1222 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 TWF1Q12792 350 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 CCDC85BQ15834 202 aaPredicted RBP10.46□□□□□ -0.73
CLN8-202ENST00000517514 MGAT5BQ3V5L5 792 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 ANKRD54Q6NXT1 300 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 PMF1Q6P1K2 205 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 POTEHQ6S545 545 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 VSTM1Q6UX27 236 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 BHLHA9Q7RTU4 235 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 DNAAF5Q86Y56 855 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 PASD1Q8IV76 773 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 SCN4BQ8IWT1 228 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 MICALL1Q8N3F8 863 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 OR8K1Q8NGG5 319 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 GIPC2Q8TF65 315 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 SECISBP2LQ93073 1101 aaKnown RBP10.46□□□□□ -0.73
CLN8-202ENST00000517514 SPATA17Q96L03 361 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 C8orf48Q96LL4 319 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 SEPT5Q99719 369 aaPredicted RBP10.46□□□□□ -0.73
CLN8-202ENST00000517514 S1PR5Q9H228 398 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 LHX5Q9H2C1 402 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 ZNF334Q9HCZ1 680 aaPredicted RBP10.46□□□□□ -0.73
CLN8-202ENST00000517514 HCFC1R1Q9NWW0 138 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 TAS2R14Q9NYV8 317 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 IL37Q9NZH6 218 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 IMPACTQ9P2X3 320 aa10.46□□□□□ -0.73
CLN8-202ENST00000517514 UNC80Q8N2C7 3258 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.45□□□□□ -0.74
CLN8-202ENST00000517514 SLC38A8A6NNN8 435 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 PRRG1O14668 218 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 XPO1O14980 1071 aaKnown RBP10.45□□□□□ -0.74
CLN8-202ENST00000517514 CCL16O15467 120 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 SERPING1P05155 500 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 POU2F2P09086 479 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 FOSL2P15408 326 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 HOXA9P31269 272 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 GRIK1P39086 918 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 PLA2G4AP47712 749 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 PDE6CP51160 858 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 BCAT1P54687 386 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 KLHL30Q0D2K2 578 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 BST2Q10589 180 aaKnown RBP10.45□□□□□ -0.74
CLN8-202ENST00000517514 PTP4A2Q12974 167 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 STILQ15468 1287 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 RAB41Q5JT25 222 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 CCDC149Q6ZUS6 474 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 TMEM150AQ86TG1 271 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 PIGZQ86VD9 579 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 ZNF677Q86XU0 584 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 TMC8Q8IU68 726 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 HS6ST3Q8IZP7 471 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 C1orf131Q8NDD1 294 aaKnown RBP10.45□□□□□ -0.74
CLN8-202ENST00000517514 CMASQ8NFW8 434 aaPredicted RBP10.45□□□□□ -0.74
CLN8-202ENST00000517514 SCAMP5Q8TAC9 235 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 CASP10Q92851 521 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 PABPC5Q96DU9 382 aaKnown RBP10.45□□□□□ -0.74
CLN8-202ENST00000517514 SLC4A5Q9BY07 1137 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 UBXN6Q9BZV1 441 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 NUCKS1Q9H1E3 243 aaKnown RBP10.45□□□□□ -0.74
CLN8-202ENST00000517514 IL21Q9HBE4 155 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 DMAP1Q9NPF5 467 aaPredicted RBP10.45□□□□□ -0.74
CLN8-202ENST00000517514 ZDHHC7Q9NXF8 308 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 DNMT3BQ9UBC3 853 aaKnown RBP10.45□□□□□ -0.74
CLN8-202ENST00000517514 DOCK8Q8NF50 2099 aa10.45□□□□□ -0.74
CLN8-202ENST00000517514 ATP8B3O60423 1300 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 A0A087X0T9 212 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 CCDC195A0A1B0GUA6 201 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 FAM92AA1XBS5 289 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 ZNF263O14978 683 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 MED7O43513 233 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 MOSPD3O75425 235 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 TADA3O75528 432 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 HNRNPA1P09651 372 aaKnown RBP eCLIP10.44□□□□□ -0.74
CLN8-202ENST00000517514 FAM228BP0C875 321 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 SETSIPP0DME0 302 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 ELF1P32519 619 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 EIF4A3P38919 411 aaKnown RBP10.44□□□□□ -0.74
CLN8-202ENST00000517514 CCR2P41597 374 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 TUFMP49411 452 aaKnown RBP10.44□□□□□ -0.74
CLN8-202ENST00000517514 RGS7P49802 495 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 KIF11P52732 1056 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 NTHL1P78549 312 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 CDK17Q00537 523 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 CLEC16AQ2KHT3 1053 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 PTPN20Q4JDL3 420 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 PPM1LQ5SGD2 360 aa10.44□□□□□ -0.74
CLN8-202ENST00000517514 RARS2Q5T160 578 aaKnown RBP10.44□□□□□ -0.74
CLN8-202ENST00000517514 NAA35Q5VZE5 725 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms