RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 CCDC17Q96LX7 622 aa3.55□□□□□ -1.84
RNU6-1088P-201ENST00000516850 FYTTD1Q96QD9 318 aaKnown RBP3.55□□□□□ -1.84
RNU6-1088P-201ENST00000516850 SNX18Q96RF0 628 aa3.55□□□□□ -1.84
RNU6-1088P-201ENST00000516850 MACROD1Q9BQ69 325 aa3.55□□□□□ -1.84
RNU6-1088P-201ENST00000516850 BRINP2Q9C0B6 783 aa3.55□□□□□ -1.84
RNU6-1088P-201ENST00000516850 CIPCQ9C0C6 399 aa3.55□□□□□ -1.84
RNU6-1088P-201ENST00000516850 ELOVL5Q9NYP7 299 aa3.55□□□□□ -1.84
RNU6-1088P-201ENST00000516850 STAP2Q9UGK3 403 aa3.55□□□□□ -1.84
RNU6-1088P-201ENST00000516850 A0A088AWK7 358 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 E2F8A0AVK6 867 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 AP4M1O00189 453 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 PHKG2P15735 406 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 IL1R2P27930 398 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 PRKAR1BP31321 381 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 DGKEP52429 567 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 POLGP54098 1239 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 RAB32Q13637 225 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 LAMB3Q13751 1172 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 RABEP1Q15276 862 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 C4orf46Q504U0 113 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 DENND2CQ68D51 928 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 FCRL6Q6DN72 434 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 KIRREL2Q6UWL6 708 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 ZNF280BQ86YH2 543 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 DENND1CQ8IV53 801 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 SPARTQ8N0X7 666 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 ADAMTS18Q8TE60 1221 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 DIS3LQ8TF46 1054 aaKnown RBP3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 CUL5Q93034 780 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 PPP2R3CQ969Q6 453 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 RITA1Q96K30 269 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 ZNF48Q96MX3 618 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 LENG8Q96PV6 779 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 MESP1Q9BRJ9 268 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 TMEM79Q9BSE2 394 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 CXorf36Q9H7Y0 433 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 PDGFCQ9NRA1 345 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 PI4KBQ9UBF8 816 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 AMFRQ9UKV5 643 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 PNMA8BQ9ULN7 279 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 GABRQQ9UN88 632 aa3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 NOP58Q9Y2X3 529 aaKnown RBP3.54□□□□□ -1.84
RNU6-1088P-201ENST00000516850 MYMKA6NI61 221 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 TMEM232C9JQI7 657 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 BTN3A1O00481 513 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 CES2O00748 559 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 ADAMTS3O15072 1205 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 ERC2O15083 957 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 RNF8O76064 485 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 TOP3BO95985 862 aaKnown RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 CSF1RP07333 972 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 CYP2A6P11509 494 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 NCLP19338 710 aaKnown RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 HTR1BP28222 390 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 MTHFSP49914 203 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 RENBPP51606 427 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 ALDH5A1P51649 535 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 ANAPC15P60006 121 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 E2F1Q01094 437 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 CTBP1Q13363 440 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 ZNF267Q14586 743 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 ZNF268Q14587 947 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 DAZAP2Q15038 168 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 MLC1Q15049 377 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 FAM187BQ17R55 369 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 PLA1AQ53H76 456 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 TMEM63BQ5T3F8 832 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 MRPL10Q7Z7H8 261 aaKnown RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 GAS2L3Q86XJ1 694 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 CELF5Q8N6W0 485 aaKnown RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 NANOGP1Q8N7R0 232 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 PLBD2Q8NHP8 589 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 KBTBD7Q8WVZ9 684 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 RAPGEF4Q8WZA2 1011 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 RSPRY1Q96DX4 576 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 MRGPRX1Q96LB2 322 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 P2RX7Q99572 595 aaKnown RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 MS4A7Q9GZW8 240 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 SPRTNQ9H040 489 aaPredicted RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 NMRK2Q9NPI5 230 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 TRNAU1APQ9NX07 287 aaKnown RBP3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 USP22Q9UPT9 525 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 PAXBP1Q9Y5B6 917 aa3.53□□□□□ -1.84
RNU6-1088P-201ENST00000516850 BTBD19C9JJ37 291 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 H3BML4 177 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 ALDH1L1O75891 902 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 FGBP02675 491 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 HOXB6P17509 224 aaKnown RBP3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 KCNA3P22001 575 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 NR4A2P43354 598 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 GHRHRQ02643 423 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 SLC13A2Q13183 592 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 CCNIQ14094 377 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 LY6KQ17RY6 165 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 CERCAMQ5T4B2 595 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 ZNF813Q6ZN06 617 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 SFTPA1Q8IWL2 248 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 C16orf71Q8IYS4 520 aaPredicted RBP3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 BPIFB1Q8TDL5 484 aa3.52□□□□□ -1.85
RNU6-1088P-201ENST00000516850 TMEM171Q8WVE6 324 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms