RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 EIF3JO75822 258 aaKnown RBP3.99□□□□□ -1.77
HERC4-215ENST00000515753 TJP3O95049 919 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 MAP4K4O95819 1239 aaPredicted RBP3.99□□□□□ -1.77
HERC4-215ENST00000515753 ONECUT2O95948 504 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 IGKV2-30P06310 120 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 RHOP08100 348 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 RPL17P18621 184 aaKnown RBP3.99□□□□□ -1.77
HERC4-215ENST00000515753 MPGP29372 298 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 LILRA4P59901 499 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 SSBP2P81877 361 aaPredicted RBP3.99□□□□□ -1.77
HERC4-215ENST00000515753 SATB1Q01826 763 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 GALEQ14376 348 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 ARHGAP29Q52LW3 1261 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 SLC44A4Q53GD3 710 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 CCSAPQ6IQ19 270 aaPredicted RBP3.99□□□□□ -1.77
HERC4-215ENST00000515753 LAYNQ6UX15 382 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 PCSK9Q8NBP7 692 aaKnown RBP3.99□□□□□ -1.77
HERC4-215ENST00000515753 SEMA6DQ8NFY4 1073 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 LRTOMTQ8WZ04 291 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 TSR2Q969E8 191 aaKnown RBP3.99□□□□□ -1.77
HERC4-215ENST00000515753 TRIM43Q96BQ3 446 aaPredicted RBP3.99□□□□□ -1.77
HERC4-215ENST00000515753 ZNF518BQ9C0D4 1074 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 BTBD1Q9H0C5 482 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 SERHLQ9NQF3 203 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 SERTAD4Q9NUC0 356 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 DDX20Q9UHI6 824 aaKnown RBP3.99□□□□□ -1.77
HERC4-215ENST00000515753 SSX2IPQ9Y2D8 614 aa3.99□□□□□ -1.77
HERC4-215ENST00000515753 ZNF521Q96K83 1311 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 BICRAQ9NZM4 1560 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 GOLIM4O00461 696 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 KIF3BO15066 747 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 BMP15O95972 392 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 NR2F6P10588 404 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 KITP10721 976 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 ZFXP17010 805 aaPredicted RBP3.98□□□□□ -1.77
HERC4-215ENST00000515753 RHCEP18577 417 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 KELP23276 732 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 KLRC1P26715 233 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 SLC7A1P30825 629 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
HERC4-215ENST00000515753 RHDQ02161 417 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 SLC10A2Q12908 348 aaPredicted RBP3.98□□□□□ -1.77
HERC4-215ENST00000515753 SLC13A2Q13183 592 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 BMPR2Q13873 1038 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 GRM3Q14832 879 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 PLAC9Q5JTB6 97 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 ANKRD16Q6P6B7 361 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 ZNF551Q7Z340 670 aaPredicted RBP3.98□□□□□ -1.77
HERC4-215ENST00000515753 MICU3Q86XE3 530 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 DGKHQ86XP1 1220 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 SMC5Q8IY18 1101 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 KRT78Q8N1N4 520 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 DNAJC5GQ8N7S2 189 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 APIPQ96GX9 242 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 ZNF48Q96MX3 618 aaPredicted RBP3.98□□□□□ -1.77
HERC4-215ENST00000515753 FCRL4Q96PJ5 515 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 SH2D3AQ9BRG2 576 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 TTYH3Q9C0H2 523 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 LRRC27Q9C0I9 530 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 XPNPEP3Q9NQH7 507 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 DDX21Q9NR30 783 aaKnown RBP eCLIP3.98□□□□□ -1.77
HERC4-215ENST00000515753 SERGEFQ9UGK8 458 aa3.98□□□□□ -1.77
HERC4-215ENST00000515753 NDRG4Q9ULP0 352 aaKnown RBP3.98□□□□□ -1.77
HERC4-215ENST00000515753 ZCCHC6Q5VYS8 1495 aaKnown RBP3.98□□□□□ -1.77
HERC4-215ENST00000515753 CACNA1IQ9P0X4 2223 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 MYO1CO00159 1063 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 CCP110O43303 1012 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 PEX14O75381 377 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 TTLL1O95922 423 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 CSF1RP07333 972 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 HNRNPCP07910 306 aaKnown RBP eCLIP3.97□□□□□ -1.77
HERC4-215ENST00000515753 EBLN1P0CF75 366 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 MYBP10242 640 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 MYF5P13349 255 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 ATF3P18847 181 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 PDE6CP51160 858 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 DGKEP52429 567 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 MYO1EQ12965 1108 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 CTBP1Q13363 440 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 SEMA5AQ13591 1074 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 E2F2Q14209 437 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 MGAT5BQ3V5L5 792 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 RNF220Q5VTB9 566 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 DARS2Q6PI48 645 aaKnown RBP3.97□□□□□ -1.77
HERC4-215ENST00000515753 ZNF66Q6ZN08 573 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 WDR53Q7Z5U6 358 aaPredicted RBP3.97□□□□□ -1.77
HERC4-215ENST00000515753 COL23A1Q86Y22 540 aaPredicted RBP3.97□□□□□ -1.77
HERC4-215ENST00000515753 FAM156AQ8NDB6 213 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 ATG4AQ8WYN0 398 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 RPL36ALQ969Q0 106 aaKnown RBP3.97□□□□□ -1.77
HERC4-215ENST00000515753 ZC3H10Q96K80 434 aaKnown RBP3.97□□□□□ -1.77
HERC4-215ENST00000515753 DHX36Q9H2U1 1008 aaKnown RBP3.97□□□□□ -1.77
HERC4-215ENST00000515753 CXorf36Q9H7Y0 433 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 A1CFQ9NQ94 594 aaKnown RBP3.97□□□□□ -1.77
HERC4-215ENST00000515753 STK32BQ9NY57 414 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 AFF4Q9UHB7 1163 aaKnown RBP3.97□□□□□ -1.77
HERC4-215ENST00000515753 TPCN1Q9ULQ1 816 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 GABRQQ9UN88 632 aa3.97□□□□□ -1.77
HERC4-215ENST00000515753 CFAP69A5D8W1 941 aa3.96□□□□□ -1.78
HERC4-215ENST00000515753 FOXN3O00409 490 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms