RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 CPXM1Q96SM3 734 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 CGRRF1Q99675 332 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 ZCWPW1Q9H0M4 648 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 ACSS3Q9H6R3 686 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 GPATCH2LQ9NWQ4 482 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 PIH1D1Q9NWS0 290 aaKnown RBP13.51□□□□□ -0.25
PHF3-212ENST00000515594 SLC17A6Q9P2U8 582 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 PGAP2Q9UHJ9 254 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 CORO1CQ9ULV4 474 aaPredicted RBP13.51□□□□□ -0.25
PHF3-212ENST00000515594 A0A0B4J269 797 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 H3BRJ5 948 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 RBP3P10745 1247 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 ATP6V1C1P21283 382 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 CNTN2Q02246 1040 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 KDSRQ06136 332 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 THOC5Q13769 683 aaKnown RBP13.51□□□□□ -0.25
PHF3-212ENST00000515594 CAPSQ13938 189 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 ADGRD1Q6QNK2 874 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 ABHD15Q6UXT9 468 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 RGS9BPQ6ZS82 235 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 TREML1Q86YW5 311 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 PPM1NQ8N819 430 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 MCUR1Q96AQ8 359 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 PTCD3Q96EY7 689 aaKnown RBP13.51□□□□□ -0.25
PHF3-212ENST00000515594 TRIM55Q9BYV6 548 aa13.51□□□□□ -0.25
PHF3-212ENST00000515594 TRPC5Q9UL62 973 aaPredicted RBP13.51□□□□□ -0.25
PHF3-212ENST00000515594 STAM2O75886 525 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 USP1O94782 785 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 ZWINTO95229 277 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 F7P08709 466 aaPredicted RBP13.5□□□□□ -0.25
PHF3-212ENST00000515594 KRT3P12035 628 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 CCNG1P51959 295 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 HMGCS2P54868 508 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 EIF3EP60228 445 aaKnown RBP13.5□□□□□ -0.25
PHF3-212ENST00000515594 TGFB2P61812 414 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 HSF5Q4G112 596 aaPredicted RBP13.5□□□□□ -0.25
PHF3-212ENST00000515594 PPP1R15BQ5SWA1 713 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 TRIM72Q6ZMU5 477 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 VPS52Q8N1B4 723 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 SCG3Q8WXD2 468 aaKnown RBP13.5□□□□□ -0.25
PHF3-212ENST00000515594 TWNKQ96RR1 684 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 IMPG2Q9BZV3 1241 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 C20orf27Q9GZN8 174 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 SLC24A2Q9UI40 661 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 MEI4A8MW99 385 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 NVLO15381 856 aaKnown RBP13.5□□□□□ -0.25
PHF3-212ENST00000515594 NEK3P51956 506 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 ZNF132P52740 706 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 PSMC1P62191 440 aaKnown RBP13.5□□□□□ -0.25
PHF3-212ENST00000515594 MXRA7P84157 204 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.5□□□□□ -0.25
PHF3-212ENST00000515594 TMEM35BQ8NCS4 154 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 SPATA18Q8TC71 538 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 PEBP4Q96S96 227 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 CYTH2Q99418 400 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 BTBD10Q9BSF8 475 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 MAGEB5Q9BZ81 275 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 SHCBP1LQ9BZQ2 653 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 TRIP11Q15643 1979 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 NFASCO94856 1347 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 E2F8A0AVK6 867 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 FCHO1O14526 889 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 ATP5HO75947 161 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 ASS1P00966 412 aaKnown RBP13.5□□□□□ -0.25
PHF3-212ENST00000515594 DLDP09622 509 aaKnown RBP13.5□□□□□ -0.25
PHF3-212ENST00000515594 MCCD1P59942 119 aaPredicted RBP13.5□□□□□ -0.25
PHF3-212ENST00000515594 PRKG1Q13976 671 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 C15orf59Q2T9L4 293 aaPredicted RBP13.5□□□□□ -0.25
PHF3-212ENST00000515594 STYK1Q6J9G0 422 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 KCTD6Q8NC69 237 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 ARMC2Q8NEN0 867 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 VCPIP1Q96JH7 1222 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 FAM161BQ96MY7 647 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 SYNCQ9H7C4 482 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 ARHGEF4Q9NR80 690 aa13.5□□□□□ -0.25
PHF3-212ENST00000515594 ERBB2P04626 1255 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 UBTFL6P0CB48 400 aaPredicted RBP13.49□□□□□ -0.25
PHF3-212ENST00000515594 KDELR1P24390 212 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 ISLR2Q6UXK2 745 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 ENDOVQ8N8Q3 282 aaKnown RBP13.49□□□□□ -0.25
PHF3-212ENST00000515594 ZNF333Q96JL9 665 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 PGLYRP2Q96PD5 576 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 SENP1Q9P0U3 644 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 DRG1Q9Y295 367 aaKnown RBP13.49□□□□□ -0.25
PHF3-212ENST00000515594 TRIM49D1C9J1S8 452 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 B4GALT5O43286 388 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 SORBS2O94875 1100 aaKnown RBP13.49□□□□□ -0.25
PHF3-212ENST00000515594 ESRRAP11474 423 aaPredicted RBP13.49□□□□□ -0.25
PHF3-212ENST00000515594 MIPP30301 263 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 ETV4P43268 484 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 RASSF2P50749 326 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 TMEM132BQ14DG7 1078 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 DRICH1Q6PGQ1 229 aaPredicted RBP13.49□□□□□ -0.25
PHF3-212ENST00000515594 ARID3BQ8IVW6 561 aaPredicted RBP13.49□□□□□ -0.25
PHF3-212ENST00000515594 UNC5BQ8IZJ1 945 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
PHF3-212ENST00000515594 UBA3Q8TBC4 463 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 TRAPPC12Q8WVT3 735 aa13.49□□□□□ -0.25
PHF3-212ENST00000515594 MMP19Q99542 508 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms