RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 LCLAT1Q6UWP7 414 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 DENND5BQ6ZUT9 1274 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 OTOP3Q7RTS5 596 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 CACNA2D4Q7Z3S7 1137 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 TMC8Q8IU68 726 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 FMNL3Q8IVF7 1028 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 ADHFE1Q8IWW8 467 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 NUP93Q8N1F7 819 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 GPR152Q8TDT2 470 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 GCNAQ96QF7 691 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 SPAG5Q96R06 1193 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 KCNK16Q96T55 309 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 SMOQ99835 787 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 LRRC3Q9BY71 257 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 UBXN6Q9BZV1 441 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 GPR88Q9GZN0 384 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 TMEM30AQ9NV96 361 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 COMMD8Q9NX08 183 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 IFNKQ9P0W0 207 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 TSPAN16Q9UKR8 245 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNF8-215ENST00000515572 MRPS23Q9Y3D9 190 aaKnown RBP12.6□□□□□ -0.39
SNF8-215ENST00000515572 PRUNE2Q8WUY3 3088 aa12.6□□□□□ -0.39
SNF8-215ENST00000515572 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 EPHB6O15197 1021 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 CYP26A1O43174 497 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 SETSIPP0DME0 302 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 MYL4P12829 197 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 HMGA1P17096 107 aaKnown RBP12.59□□□□□ -0.39
SNF8-215ENST00000515572 GNA15P30679 374 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 PPP3CCP48454 512 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 MAP3K7CLP57077 242 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 BST2Q10589 180 aaKnown RBP12.59□□□□□ -0.39
SNF8-215ENST00000515572 PRSS36Q5K4E3 855 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 SDHAF4Q5VUM1 108 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 CLEC20AQ6ZU45 233 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 GET4Q7L5D6 327 aaPredicted RBP12.59□□□□□ -0.39
SNF8-215ENST00000515572 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 TDRD5Q8NAT2 981 aaKnown RBP12.59□□□□□ -0.39
SNF8-215ENST00000515572 ZMIZ2Q8NF64 920 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 ZNF606Q8WXB4 792 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 TFAP2BQ92481 460 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 ACSF2Q96CM8 615 aaPredicted RBP12.59□□□□□ -0.39
SNF8-215ENST00000515572 IQCDQ96DY2 449 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 NUP58Q9BVL2 599 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 TTLL2Q9BWV7 592 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 EDEM3Q9BZQ6 932 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 FBXO44Q9H4M3 255 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 NLRC4Q9NPP4 1024 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 ZMYM5Q9UJ78 669 aa12.59□□□□□ -0.39
SNF8-215ENST00000515572 ANAPC1Q9H1A4 1944 aa12.58□□□□□ -0.39
SNF8-215ENST00000515572 DOCK8Q8NF50 2099 aa12.58□□□□□ -0.39
SNF8-215ENST00000515572 SOBPA7XYQ1 873 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 TNFRSF10BO14763 440 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 XPO1O14980 1071 aaKnown RBP12.58□□□□□ -0.4
SNF8-215ENST00000515572 THAP12O43422 761 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 BEST1O76090 585 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 BRD2P25440 801 aaKnown RBP12.58□□□□□ -0.4
SNF8-215ENST00000515572 YWHAQP27348 245 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 GABRR2P28476 465 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 SOX5P35711 763 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 PBX1P40424 430 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 STAT1P42224 750 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 SLC5A3P53794 718 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 JAM2P57087 298 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 ZP2Q05996 745 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 MTMR3Q13615 1198 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 SLC5A9Q2M3M2 681 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 FIGNQ5HY92 759 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 TTC30AQ86WT1 665 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 PDZD8Q8NEN9 1154 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 NUP210Q8TEM1 1887 aaPredicted RBP12.58□□□□□ -0.4
SNF8-215ENST00000515572 SLITRK1Q96PX8 696 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 ZSWIM1Q9BR11 485 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 XPO4Q9C0E2 1151 aaKnown RBP12.58□□□□□ -0.4
SNF8-215ENST00000515572 IL21Q9HBE4 155 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 ZNF334Q9HCZ1 680 aaPredicted RBP12.58□□□□□ -0.4
SNF8-215ENST00000515572 GDE1Q9NZC3 331 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 CDH7Q9ULB5 785 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 MYO6Q9UM54 1294 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 MAGED2Q9UNF1 606 aaPredicted RBP12.58□□□□□ -0.4
SNF8-215ENST00000515572 NCANO14594 1321 aa12.58□□□□□ -0.4
SNF8-215ENST00000515572 A0A1W2PRU2 124 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 LOC730098B7Z3J9 87 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 HHLA1C9JL84 531 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 M0QYV0 167 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 F11P03951 625 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 CCDC172P0C7W6 258 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 PNMA6AP0CW24 399 aaPredicted RBP12.57□□□□□ -0.4
SNF8-215ENST00000515572 LAMP2P13473 410 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 GBP2P32456 591 aaPredicted RBP12.57□□□□□ -0.4
SNF8-215ENST00000515572 CLCN1P35523 988 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 CCR2P41597 374 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 PLA2G4AP47712 749 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 PDE6CP51160 858 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 PDE4CQ08493 712 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 PKDCCQ504Y2 493 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 ARHGAP15Q53QZ3 475 aa12.57□□□□□ -0.4
SNF8-215ENST00000515572 SARM1Q6SZW1 724 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms