RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 SLC1A1P43005 524 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 BCAT1P54687 386 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 RWDD2BP57060 319 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 IKBKEQ14164 716 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 OVOS1Q6IE37 1185 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 CLEC20AQ6ZU45 233 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 ANKS1BQ7Z6G8 1248 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 PIGZQ86VD9 579 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 CEP57Q86XR8 500 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 MMGT1Q8N4V1 131 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 MSANTD4Q8NCY6 345 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-213ENST00000515418 IPO4Q8TEX9 1081 aaKnown RBP9.63□□□□□ -0.87
CPNE4-213ENST00000515418 RXFP2Q8WXD0 754 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 RPGRIP1Q96KN7 1286 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 WDR35Q9P2L0 1181 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 TMEM59LQ9UK28 342 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 CDH9Q9ULB4 789 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 FNDC1Q4ZHG4 1894 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-213ENST00000515418 LAMA3Q16787 3333 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 TANC1Q9C0D5 1861 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 OR4Q2P0C623 313 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 PDGFRAP16234 1089 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 NPR3P17342 541 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 EN2P19622 333 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-213ENST00000515418 SLC11A1P49279 550 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 SLC6A3Q01959 620 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 TAP1Q03518 808 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 C15orf59Q2T9L4 293 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-213ENST00000515418 KCNT1Q5JUK3 1230 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 FBXO38Q6PIJ6 1188 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 OLFML1Q6UWY5 402 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 NECAB2Q7Z6G3 386 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 NPAS4Q8IUM7 802 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 ANKLE1Q8NAG6 615 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 MYCBPAPQ8TBZ2 947 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 STK32AQ8WU08 396 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 RNF25Q96BH1 459 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-213ENST00000515418 CFAP57Q96MR6 1250 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 SMOQ99835 787 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 ACBD6Q9BR61 282 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 HERPUD2Q9BSE4 406 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 HEMGNQ9BXL5 484 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 GPR62Q9BZJ7 368 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 DDX47Q9H0S4 455 aaKnown RBP9.63□□□□□ -0.87
CPNE4-213ENST00000515418 ZWILCHQ9H900 591 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 KRT82Q9NSB4 513 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 PCSK1NQ9UHG2 260 aa9.63□□□□□ -0.87
CPNE4-213ENST00000515418 DMGDHQ9UI17 866 aaKnown RBP9.63□□□□□ -0.87
CPNE4-213ENST00000515418 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.63□□□□□ -0.87
CPNE4-213ENST00000515418 VWA8A3KMH1 1905 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 RANBP2P49792 3224 aaKnown RBP9.62□□□□□ -0.87
CPNE4-213ENST00000515418 C2CD4BA6NLJ0 364 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 LRCH4O75427 683 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 AP1G2O75843 785 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 TIMP1P01033 207 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 SETSIPP0DME0 302 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 TFE3P19532 575 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-213ENST00000515418 BDNFP23560 247 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 IL1R2P27930 398 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 PCSK1P29120 753 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 PLA2G4AP47712 749 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 GSCP56915 257 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-213ENST00000515418 ATP11AP98196 1134 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 PLCB3Q01970 1234 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 YWHAHQ04917 246 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-213ENST00000515418 ITIH3Q06033 890 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 PIGHQ14442 188 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-213ENST00000515418 CDO1Q16878 200 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 SMTNL2Q2TAL5 461 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 ZFYVE27Q5T4F4 411 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 FAM171A1Q5VUB5 890 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 FAM171BQ6P995 826 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 TAS1R1Q7RTX1 841 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 GPRIN1Q7Z2K8 1008 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 TMEM173Q86WV6 379 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-213ENST00000515418 RHOT1Q8IXI2 618 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 ZMIZ2Q8NF64 920 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 MYLPFQ96A32 169 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 DNAI2Q9GZS0 605 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 TTC7AQ9ULT0 858 aaPredicted RBP9.62□□□□□ -0.87
CPNE4-213ENST00000515418 PCDHB8Q9UN66 801 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 FAN1Q9Y2M0 1017 aa9.62□□□□□ -0.87
CPNE4-213ENST00000515418 XPO1O14980 1071 aaKnown RBP9.61□□□□□ -0.87
CPNE4-213ENST00000515418 PARNO95453 639 aaKnown RBP9.61□□□□□ -0.87
CPNE4-213ENST00000515418 GALTP07902 379 aa9.61□□□□□ -0.87
CPNE4-213ENST00000515418 FAM200BP0CF97 657 aa9.61□□□□□ -0.87
CPNE4-213ENST00000515418 MAN1A1P33908 653 aa9.61□□□□□ -0.87
CPNE4-213ENST00000515418 RPL34P49207 117 aaKnown RBP9.61□□□□□ -0.87
CPNE4-213ENST00000515418 ZNF143P52747 638 aaPredicted RBP9.61□□□□□ -0.87
CPNE4-213ENST00000515418 VSNL1P62760 191 aa9.61□□□□□ -0.87
CPNE4-213ENST00000515418 ADIGQ0VDE8 80 aa9.61□□□□□ -0.87
CPNE4-213ENST00000515418 TRADDQ15628 312 aa9.61□□□□□ -0.87
CPNE4-213ENST00000515418 CCDC14Q49A88 953 aa9.61□□□□□ -0.87
CPNE4-213ENST00000515418 INTS6LQ5JSJ4 861 aaKnown RBP9.61□□□□□ -0.87
CPNE4-213ENST00000515418 CNKSR3Q6P9H4 555 aa9.61□□□□□ -0.87
CPNE4-213ENST00000515418 FAM35AQ86V20 835 aa9.61□□□□□ -0.87
CPNE4-213ENST00000515418 SLC13A5Q86YT5 568 aaPredicted RBP9.61□□□□□ -0.87
CPNE4-213ENST00000515418 CCDC50Q8IVM0 306 aa9.61□□□□□ -0.87
CPNE4-213ENST00000515418 THEM5Q8N1Q8 247 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms