RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ABHD17BQ5VST6 288 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 ERAP2Q6P179 960 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 CRTC1Q6UUV9 634 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 KIAA0408Q6ZU52 694 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 USP49Q70CQ1 688 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 MAVSQ7Z434 540 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 SYTL1Q8IYJ3 562 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 TMEM41AQ96HV5 264 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 AIFM2Q9BRQ8 373 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 MAGEB5Q9BZ81 275 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 TRIM5Q9C035 493 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 CASS4Q9NQ75 786 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 LRCH1Q9Y2L9 728 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 CEP83Q9Y592 693 aa6.15□□□□□ -1.42
HMGCS1-207ENST00000514610 ADGRA2Q96PE1 1338 aa6.15□□□□□ -1.43
HMGCS1-207ENST00000514610 AQP7P3A6NL99 342 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 ADM5C9JUS6 153 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 AGPSO00116 658 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 ADAMTS3O15072 1205 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 ZNF202O95125 648 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 HGFP14210 728 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 TNFRSF1AP19438 455 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 PDE6CP51160 858 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 COPAP53621 1224 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 TNFAIP2Q03169 654 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 EIF2B5Q13144 721 aaKnown RBP6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 LY6KQ17RY6 165 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 DEPDC1Q5TB30 811 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 MANEALQ5VSG8 457 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 CRIP3Q6Q6R5 217 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 VRK3Q8IV63 474 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 SPARTQ8N0X7 666 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 ENAHQ8N8S7 591 aaPredicted RBP6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 TOR1AIP2Q8NFQ8 470 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 CYP2W1Q8TAV3 490 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 SELENOOQ9BVL4 669 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 FAM83DQ9H4H8 585 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 SYBUQ9NX95 663 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 RGL1Q9NZL6 768 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 SLC39A10Q9ULF5 831 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 MYRFQ9Y2G1 1151 aa6.14□□□□□ -1.43
HMGCS1-207ENST00000514610 WDR27A2RRH5 827 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 ZAR1LA6NP61 321 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 PODXLO00592 558 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 YY2O15391 372 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 RGS10O43665 173 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 VNN1O95497 513 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 ATICP31939 592 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 ITIH3Q06033 890 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 STARD3Q14849 445 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 PTPAQ15257 358 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 RAP1GAP2Q684P5 730 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 Q6YL49 198 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 Q6ZPA2 131 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 DTX2Q86UW9 622 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 ABRAQ8N0Z2 381 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 Q8N1X5 172 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 MORC4Q8TE76 937 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 IPO4Q8TEX9 1081 aaKnown RBP6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 ZNF384Q8TF68 577 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 ZBTB45Q96K62 511 aaPredicted RBP6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 DKK3Q9UBP4 350 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 VPS51Q9UID3 782 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 HPSEQ9Y251 543 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 RIPOR2Q9Y4F9 1068 aa6.13□□□□□ -1.43
HMGCS1-207ENST00000514610 GRID2IPA4D2P6 1211 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 IFRD1O00458 451 aaPredicted RBP6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 CHRM2P08172 466 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 MAKP20794 623 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 ALDH9A1P49189 494 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 CLCN2P51788 898 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 ATXN1P54253 815 aaKnown RBP6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 BCAT1P54687 386 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 NXPH1P58417 271 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 COL4A3Q01955 1670 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 TRIM14Q14142 442 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 PUM1Q14671 1186 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 KRT72Q14CN4 511 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 TXNRD1Q16881 649 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 GRAMD1BQ3KR37 738 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 CERCAMQ5T4B2 595 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 KIAA0895LQ68EN5 471 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 GGT6Q6P531 493 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 ZNF627Q7L945 461 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 SLC44A3Q8N4M1 653 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 SMCR8Q8TEV9 937 aaPredicted RBP6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 OSCP1Q8WVF1 389 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 LINC00476Q8WZB0 136 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 LARP4BQ92615 738 aaKnown RBP6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 GLG1Q92896 1179 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 FKBP10Q96AY3 582 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 SNX27Q96L92 541 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 PSMD1Q99460 953 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 EIF2AQ9BY44 585 aaKnown RBP6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 PCDHAC1Q9H158 963 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 IGSF9Q9P2J2 1179 aa6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 ZMYND8Q9ULU4 1186 aaPredicted RBP6.12□□□□□ -1.43
HMGCS1-207ENST00000514610 FER1L4A9Z1Z3 1794 aa6.11□□□□□ -1.43
HMGCS1-207ENST00000514610 MAST3O60307 1309 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms