RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	BCCIP	Q9P287	314 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CCDC195	A0A1B0GUA6	201 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006		J3KTA2	159 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MFAP3L	O75121	409 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	IPO13	O94829	963 aa	Known RBP	5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	AR	P10275	920 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	GCSH	P23434	173 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	DGKE	P52429	567 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ZNF134	P52741	427 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	KIAA2012	Q0VF49	1180 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	BTBD16	Q32M84	506 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ABLIM2	Q6H8Q1	611 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TTC30A	Q86WT1	665 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TMEM57	Q8N5G2	664 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	NSUN7	Q8NE18	718 aa	Known RBP	5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	OR52N2	Q8NGI0	321 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CEP70	Q8NHQ1	597 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	WDR60	Q8WVS4	1066 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PPP2R3C	Q969Q6	453 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	HVCN1	Q96D96	273 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MARS2	Q96GW9	593 aa	Known RBP	5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TMEM176A	Q96HP8	235 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ZNF668	Q96K58	619 aa	Predicted RBP	5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PNKP	Q96T60	521 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TWSG1	Q9GZX9	223 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	BRD8	Q9H0E9	1235 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ZCWPW1	Q9H0M4	648 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TBC1D22B	Q9NU19	505 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TMEM160	Q9NX00	188 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	DNAJB11	Q9UBS4	358 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	DAPP1	Q9UN19	280 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	AFG3L2	Q9Y4W6	797 aa		5.7	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PNMA6E	A0A0J9YXQ4	647 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ZSCAN9	O15535	394 aa	Predicted RBP	5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	KRT38	O76015	456 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SPATA31D3	P0C874	917 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MED14OS	P0DP75	135 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	KCNA3	P22001	575 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CCR5	P51681	352 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	NR1H2	P55055	460 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CHRND	Q07001	517 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MYO1E	Q12965	1108 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RPS6KA2	Q15349	733 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TOMM20	Q15388	145 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ZNF385B	Q569K4	471 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	METTL24	Q5JXM2	366 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MAP3K21	Q5TCX8	1036 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TMEM108	Q6UXF1	575 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SPATA31D4	Q6ZUB0	917 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TCP11L2	Q8N4U5	519 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TSPYL6	Q8N831	410 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	DNAJB14	Q8TBM8	379 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	POC1B	Q8TC44	478 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ABHD5	Q8WTS1	349 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RRP36	Q96EU6	259 aa	Known RBP	5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TWNK	Q96RR1	684 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	NOD2	Q9HC29	1040 aa		5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	HECA	Q9UBI9	543 aa	Predicted RBP	5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	C19orf53	Q9UNZ5	99 aa	Predicted RBP	5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	MRPS17	Q9Y2R5	130 aa	Known RBP	5.69	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	FER1L4	A9Z1Z3	1794 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TCAF2	A6NFQ2	919 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CD3EAP	O15446	510 aa	Known RBP	5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	B4GALT3	O60512	393 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PPP6R2	O75170	966 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	DDX58	O95786	925 aa	Known RBP	5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	INHBB	P09529	407 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ITGAL	P20701	1170 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RPS19	P39019	145 aa	Known RBP	5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	AFF3	P51826	1226 aa	Known RBP	5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	GRM7	Q14831	915 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	GRM4	Q14833	912 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ELAVL1	Q15717	326 aa	Known RBP	5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PTCHD3	Q3KNS1	767 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TRIM60	Q495X7	471 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TTC22	Q5TAA0	569 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CCDC30	Q5VVM6	783 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ATG14	Q6ZNE5	492 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	UCMA	Q8WVF2	138 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CPT1B	Q92523	772 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	DACT3	Q96B18	629 aa	Predicted RBP	5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	LRRC37B	Q96QE4	947 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	LMF1	Q96S06	567 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PTDSS2	Q9BVG9	487 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PLA2G12B	Q9BX93	195 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	GPR63	Q9BZJ6	419 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	TRIM5	Q9C035	493 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	VPS16	Q9H269	839 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SMOC2	Q9H3U7	446 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CXorf36	Q9H7Y0	433 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	CHODL	Q9H9P2	273 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	UNKL	Q9H9P5	680 aa	Known RBP	5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	SEC61A2	Q9H9S3	476 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	PREB	Q9HCU5	417 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	G6PC2	Q9NQR9	355 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	OLA1	Q9NTK5	396 aa	Known RBP	5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	NDUFAF4	Q9P032	175 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	ARHGAP26	Q9UNA1	814 aa		5.68	□□□□□ -1.5
CALCOCO2-222	ENST00000514006	RRP7A	Q9Y3A4	280 aa	Known RBP	5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms