RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 PODXLO00592 558 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 USP12O75317 370 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 GJB6O95452 261 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 MARCKSP29966 332 aaPredicted RBP8.29□□□□□ -1.08
CLDND1-229ENST00000513988 NMT1P30419 496 aaKnown RBP8.29□□□□□ -1.08
CLDND1-229ENST00000513988 RFC5P40937 340 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 TNFSF9P41273 254 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 GRIA2P42262 883 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 WASP42768 502 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 TNFRSF4P43489 277 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 NAPAP54920 295 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 FAM160A1Q05DH4 1040 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 KDSRQ06136 332 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 MESP2Q0VG99 397 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 MXD4Q14582 209 aaPredicted RBP8.29□□□□□ -1.08
CLDND1-229ENST00000513988 ZNF77Q15935 545 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 C1QL3Q5VWW1 255 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 TXNDC8Q6A555 127 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 CENPPQ6IPU0 288 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 MAMDC2Q7Z304 686 aaPredicted RBP8.29□□□□□ -1.08
CLDND1-229ENST00000513988 SRBD1Q8N5C6 995 aaKnown RBP8.29□□□□□ -1.08
CLDND1-229ENST00000513988 TTC9BQ8N6N2 239 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 RDM1Q8NG50 284 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 PANK1Q8TE04 598 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 MRPS31Q92665 395 aaKnown RBP8.29□□□□□ -1.08
CLDND1-229ENST00000513988 ERLEC1Q96DZ1 483 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 CEP170P1Q96L14 293 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 TEKT3Q9BXF9 490 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 LINC00597Q9H2U6 94 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 DHX33Q9H6R0 707 aaKnown RBP8.29□□□□□ -1.08
CLDND1-229ENST00000513988 ARHGEF4Q9NR80 690 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 ANAPC2Q9UJX6 822 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 GDAQ9Y2T3 454 aa8.29□□□□□ -1.08
CLDND1-229ENST00000513988 A0A087X0B3 334 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 A0A1W2PQF6 199 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 METTL12A8MUP2 240 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 ACTN4O43707 911 aaKnown RBP8.28□□□□□ -1.08
CLDND1-229ENST00000513988 DFNA5O60443 496 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 ITGAVP06756 1048 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 ABCB4P21439 1286 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 RBMS1P29558 406 aaKnown RBP8.28□□□□□ -1.08
CLDND1-229ENST00000513988 SLC6A11P48066 632 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 ASIC1P78348 528 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 ST3GAL1Q11201 340 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 CLN3Q13286 438 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 GPR17Q13304 367 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 EMC2Q15006 297 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 TMEM132AQ24JP5 1023 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 GAB4Q2WGN9 574 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 LRCH2Q5VUJ6 765 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 MON1AQ86VX9 555 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 EID2Q8N6I1 236 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 ATAD1Q8NBU5 361 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 C1orf216Q8TAB5 229 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 IPO4Q8TEX9 1081 aaKnown RBP8.28□□□□□ -1.08
CLDND1-229ENST00000513988 SNX19Q92543 992 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 SUSD3Q96L08 255 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 MAP3K14Q99558 947 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 RIT2Q99578 217 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 SEPT5Q99719 369 aaPredicted RBP8.28□□□□□ -1.08
CLDND1-229ENST00000513988 WSB2Q9NYS7 404 aaPredicted RBP8.28□□□□□ -1.08
CLDND1-229ENST00000513988 LRRK1Q38SD2 2015 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 DENND4CQ5VZ89 1909 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 CCDC168Q8NDH2 2452 aa8.28□□□□□ -1.08
CLDND1-229ENST00000513988 MTMR11A4FU01 709 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 WIPF3A6NGB9 483 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 BTBD18B2RXH4 712 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 EFSO43281 561 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 DDAH1O94760 285 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 NTSR1P30989 418 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 MCM4P33991 863 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 EIF2DP41214 584 aaKnown RBP8.27□□□□□ -1.09
CLDND1-229ENST00000513988 GRIA4P48058 902 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 NLRP12P59046 1061 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 PSMC5P62195 406 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 SKOR1P84550 965 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 E2F1Q01094 437 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 YWHAHQ04917 246 aaPredicted RBP8.27□□□□□ -1.09
CLDND1-229ENST00000513988 POU5F1BQ06416 359 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 TRDNQ13061 729 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 RESTQ13127 1097 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 NAA30Q147X3 362 aaPredicted RBP8.27□□□□□ -1.09
CLDND1-229ENST00000513988 TBR1Q16650 682 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 JAKMIP3Q5VZ66 844 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 WWC2Q6AWC2 1192 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 SDE2Q6IQ49 451 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 NOSTRINQ8IVI9 506 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 CCDC82Q8N4S0 544 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 NSUN7Q8NE18 718 aaKnown RBP8.27□□□□□ -1.09
CLDND1-229ENST00000513988 CRYGNQ8WXF5 182 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 MRGPRX1Q96LB2 322 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 REPIN1Q9BWE0 567 aaKnown RBP8.27□□□□□ -1.09
CLDND1-229ENST00000513988 PRR14Q9BWN1 585 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 OXCT2Q9BYC2 517 aaPredicted RBP8.27□□□□□ -1.09
CLDND1-229ENST00000513988 GLT8D2Q9H1C3 349 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 SLC6A17Q9H1V8 727 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 KDM4CQ9H3R0 1056 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 ZBTB40Q9NUA8 1239 aa8.27□□□□□ -1.09
CLDND1-229ENST00000513988 ATXN7L1Q9ULK2 861 aaPredicted RBP8.27□□□□□ -1.09
CLDND1-229ENST00000513988 PPME1Q9Y570 386 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms