RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	ZFR	Q96KR1	1074 aa	Known RBP	11.62	□□□□□ -0.55
PDCD6-210	ENST00000513582	HEPH	Q9BQS7	1158 aa		11.62	□□□□□ -0.55
PDCD6-210	ENST00000513582	VPS11	Q9H270	941 aa		11.62	□□□□□ -0.55
PDCD6-210	ENST00000513582	TMEM150B	A6NC51	233 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	TISP43	B9A030	160 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582		F5H6K3	240 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	PEX1	O43933	1283 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	POLR2M	P0CAP2	368 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	ALDH1A3	P47895	512 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	EIF2B2	P49770	351 aa	Known RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	CD300C	Q08708	224 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	PRKD1	Q15139	912 aa	Predicted RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	ASPRV1	Q53RT3	343 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	TRIML2	Q8N7C3	387 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	RSL24D1	Q9UHA3	163 aa	Known RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	COQ6	Q9Y2Z9	468 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	AP4B1	Q9Y6B7	739 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	KDM3A	Q9Y4C1	1321 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	DNAJA2	O60884	412 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	PROC	P04070	461 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	MAPK4	P31152	587 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	MAN1A1	P33908	653 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	HADHB	P55084	474 aa	Known RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	OASL	Q15646	514 aa	Known RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	FAM102B	Q5T8I3	360 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	PPP1R2P3	Q6NXS1	205 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	LLGL2	Q6P1M3	1020 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	LPCAT2	Q7L5N7	544 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	HPS6	Q86YV9	775 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	ARHGEF19	Q8IW93	802 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	PAFAH2	Q99487	392 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	HNRNPAB	Q99729	332 aa	Known RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	AMN	Q9BXJ7	453 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	PAIP1	Q9H074	479 aa	Known RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	SOX13	Q9UN79	622 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	MAD1L1	Q9Y6D9	718 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	CEPT1	Q9Y6K0	416 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	TBC1D12	O60347	775 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	CBFA2T3	O75081	653 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	TNFAIP8	O95379	198 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	OCM2	P0CE71	109 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	OCM	P0CE72	109 aa	Predicted RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	PIM1	P11309	404 aa	Predicted RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	BMP3	P12645	472 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	KPNA1	P52294	538 aa	Predicted RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	SLC12A3	P55017	1021 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	TGFBI	Q15582	683 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	FAM182A	Q5T1J6	154 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	AAGAB	Q6PD74	315 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	POTEH	Q6S545	545 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	FASTKD5	Q7L8L6	764 aa	Known RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	C14orf80	Q86SX3	495 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	TDRP	Q86YL5	185 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	BBOF1	Q8ND07	529 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	MORC4	Q8TE76	937 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	QTRT2	Q9H974	415 aa	Known RBP	11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	PLGRKT	Q9HBL7	147 aa		11.61	□□□□□ -0.55
PDCD6-210	ENST00000513582	PAPPA	Q13219	1627 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	ATAD5	Q96QE3	1844 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	FUOM	A2VDF0	154 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	GTPBP10	A4D1E9	387 aa	Known RBP	11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	CRTAM	O95727	393 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	MT-ND3	P03897	115 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	HOXA7	P31268	230 aa	Predicted RBP	11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	ARSE	P51690	589 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	ATXN3	P54252	364 aa	Predicted RBP	11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	TMPRSS15	P98073	1019 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	GAD2	Q05329	585 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	DLGAP5	Q15398	846 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	SBK1	Q52WX2	424 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	DENND5B	Q6ZUT9	1274 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	SLC47A2	Q86VL8	602 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	OGFOD1	Q8N543	542 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	PLEKHO2	Q8TD55	490 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	PLCH1	Q4KWH8	1693 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	LOC100653049	A0A140TA62	436 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582		I3L4J1	428 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	SLC16A3	O15427	465 aa	Known RBP	11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	KRT34	O76011	436 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	NAT1	P18440	290 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	CD58	P19256	250 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	STIP1	P31948	543 aa	Known RBP	11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	SLC5A3	P53794	718 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	HDAC4	P56524	1084 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	ZNF543	Q08ER8	600 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	SNAPC2	Q13487	334 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	ALCAM	Q13740	583 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	SMAD1	Q15797	465 aa	Known RBP	11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	AOC3	Q16853	763 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	HSF5	Q4G112	596 aa	Predicted RBP	11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	NOP9	Q86U38	636 aa	Known RBP	11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	CATSPER3	Q86XQ3	398 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	PASD1	Q8IV76	773 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	CPNE9	Q8IYJ1	553 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	BANP	Q8N9N5	519 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	COX4I2	Q96KJ9	171 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	EBF4	Q9BQW3	602 aa		11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.6	□□□□□ -0.55
PDCD6-210	ENST00000513582		Q9H521	79 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms