RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 KRT82Q9NSB4 513 aa18.84■□□□□ 0.61
DDR1-272ENST00000513243 OBP2AQ9NY56 170 aa18.84■□□□□ 0.61
DDR1-272ENST00000513243 GREB1Q4ZG55 1949 aa18.84■□□□□ 0.61
DDR1-272ENST00000513243 COL4A3Q01955 1670 aa18.83■□□□□ 0.61
DDR1-272ENST00000513243 DENND4CQ5VZ89 1909 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 ARNTLO00327 626 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 PMM2O15305 246 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 AP1G2O75843 785 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 AVPR1AP37288 418 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 MARSP56192 900 aaKnown RBP18.83■□□□□ 0.6
DDR1-272ENST00000513243 PRKCQQ04759 706 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 YAF2Q8IY57 180 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 NUP93Q8N1F7 819 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 ZMIZ2Q8NF64 920 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 USP13Q92995 863 aaPredicted RBP18.83■□□□□ 0.6
DDR1-272ENST00000513243 CYFIP2Q96F07 1278 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 SLC22A12Q96S37 553 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 CYP2S1Q96SQ9 504 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 HNRNPABQ99729 332 aaKnown RBP18.83■□□□□ 0.6
DDR1-272ENST00000513243 SMOQ99835 787 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 DDX23Q9BUQ8 820 aaKnown RBP18.83■□□□□ 0.6
DDR1-272ENST00000513243 FOXQ1Q9C009 403 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 DMAP1Q9NPF5 467 aaPredicted RBP18.83■□□□□ 0.6
DDR1-272ENST00000513243 TRPV5Q9NQA5 729 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 HEBP1Q9NRV9 189 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 CISHQ9NSE2 258 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 EHD2Q9NZN4 543 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 CCL26Q9Y258 94 aa18.83■□□□□ 0.6
DDR1-272ENST00000513243 OBSL1O75147 1896 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 C2orf78A6NCI8 922 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 TNFRSF10BO14763 440 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 CHADO15335 359 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 BEST1O76090 585 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 FGFR1OPO95684 399 aaKnown RBP18.82■□□□□ 0.6
DDR1-272ENST00000513243 RFX1P22670 979 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 ADORA2BP29275 332 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 TAF10Q12962 218 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 ZNF394Q53GI3 561 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 TTC39CQ8N584 583 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 CELF5Q8N6W0 485 aaKnown RBP18.82■□□□□ 0.6
DDR1-272ENST00000513243 PRSS33Q8NF86 280 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 GPT2Q8TD30 523 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 BPIFB1Q8TDL5 484 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 CSNK1G1Q9HCP0 422 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 TRPC7Q9HCX4 862 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 TDP1Q9NUW8 608 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 TRPM5Q9NZQ8 1165 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 GCNT4Q9P109 453 aa18.82■□□□□ 0.6
DDR1-272ENST00000513243 NUP210Q8TEM1 1887 aaPredicted RBP18.82■□□□□ 0.6
DDR1-272ENST00000513243 KANSL1LA0AUZ9 987 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 ZNF840PA6NDX5 716 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 SHISA7A6NL88 538 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 TRIM21P19474 475 aaKnown RBP18.81■□□□□ 0.6
DDR1-272ENST00000513243 CD72P21854 359 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 RAD23BP54727 409 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 KCNH2Q12809 1159 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 IFRD2Q12894 506 aaPredicted RBP18.81■□□□□ 0.6
DDR1-272ENST00000513243 LRMPQ12912 555 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 CUL2Q13617 745 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 DPCR1Q3MIW9 517 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 TPRG1Q6ZUI0 275 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 SCAMP5Q8TAC9 235 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 LMO3Q8TAP4 145 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 ZFYVE19Q96K21 471 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 FAM124BQ9H5Z6 455 aaPredicted RBP18.81■□□□□ 0.6
DDR1-272ENST00000513243 SIT1Q9Y3P8 196 aa18.81■□□□□ 0.6
DDR1-272ENST00000513243 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.81■□□□□ 0.6
DDR1-272ENST00000513243 TRAV19A0A0A6YYK7 116 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 P4HA2O15460 535 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 RTN3O95197 1032 aaPredicted RBP18.8■□□□□ 0.6
DDR1-272ENST00000513243 FAM200BP0CF97 657 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 CCDC192P0DO97 292 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 YWHAQP27348 245 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 PPP3CCP48454 512 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 NUBP1P53384 320 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 SLC5A3P53794 718 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 MAP3K7CLP57077 242 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 ZNF268Q14587 947 aaPredicted RBP18.8■□□□□ 0.6
DDR1-272ENST00000513243 ARHGAP29Q52LW3 1261 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 IRF2BP1Q8IU81 584 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 ARL14EPQ8N8R7 260 aaPredicted RBP18.8■□□□□ 0.6
DDR1-272ENST00000513243 SLC4A11Q8NBS3 891 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 PJA1Q8NG27 643 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 RIN3Q8TB24 985 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 TMEM176AQ96HP8 235 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 HEXIM2Q96MH2 286 aaKnown RBP18.8■□□□□ 0.6
DDR1-272ENST00000513243 SLITRK1Q96PX8 696 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 PRRX2Q99811 253 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 DNAI2Q9GZS0 605 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 IL37Q9NZH6 218 aa18.8■□□□□ 0.6
DDR1-272ENST00000513243 MTF2Q9Y483 593 aaPredicted RBP18.8■□□□□ 0.6
DDR1-272ENST00000513243 GALR2O43603 387 aaPredicted RBP18.79■□□□□ 0.6
DDR1-272ENST00000513243 CKMP06732 381 aa18.79■□□□□ 0.6
DDR1-272ENST00000513243 DCNP07585 359 aaKnown RBP18.79■□□□□ 0.6
DDR1-272ENST00000513243 USP17L7P0C7H9 530 aa18.79■□□□□ 0.6
DDR1-272ENST00000513243 HDCP19113 662 aa18.79■□□□□ 0.6
DDR1-272ENST00000513243 CETN1Q12798 172 aa18.79■□□□□ 0.6
DDR1-272ENST00000513243 TCF15Q12870 199 aa18.79■□□□□ 0.6
DDR1-272ENST00000513243 PPP1R26Q5T8A7 1209 aaPredicted RBP18.79■□□□□ 0.6
DDR1-272ENST00000513243 CLEC20AQ6ZU45 233 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms