RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 TMEFF1Q8IYR6 380 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 CCDC33Q8N5R6 958 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 STKLD1Q8NE28 680 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 ZNF560Q96MR9 790 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 POLMQ9NP87 494 aaPredicted RBP14.95□□□□□ -0.02
SPCS3-204ENST00000513139 SLC6A14Q9UN76 642 aa14.95□□□□□ -0.02
SPCS3-204ENST00000513139 ASH1LQ9NR48 2969 aaKnown RBP14.95□□□□□ -0.02
SPCS3-204ENST00000513139 A0A0A0MRY4 1105 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 PLA2G4BP0C869 781 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 HNRNPLP14866 589 aaKnown RBP eCLIP14.94□□□□□ -0.02
SPCS3-204ENST00000513139 HDCP19113 662 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 CYP2F1P24903 491 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 EIF2DP41214 584 aaKnown RBP14.94□□□□□ -0.02
SPCS3-204ENST00000513139 ACOT2P49753 483 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 ZNF131P52739 623 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 ATXN3P54252 364 aaPredicted RBP14.94□□□□□ -0.02
SPCS3-204ENST00000513139 GFPT1Q06210 699 aaPredicted RBP14.94□□□□□ -0.02
SPCS3-204ENST00000513139 KCNB1Q14721 858 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 ZRSR1Q15695 479 aaKnown RBP14.94□□□□□ -0.02
SPCS3-204ENST00000513139 MAP7D1Q3KQU3 841 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 CFAP221Q4G0U5 840 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 SOWAHCQ53LP3 525 aaPredicted RBP14.94□□□□□ -0.02
SPCS3-204ENST00000513139 SDHAF4Q5VUM1 108 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 SLFN12LQ6IEE8 588 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 CHCHD4Q8N4Q1 142 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 ARL14EPQ8N8R7 260 aaPredicted RBP14.94□□□□□ -0.02
SPCS3-204ENST00000513139 IL17RCQ8NAC3 791 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 TTC16Q8NEE8 873 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 RLN3Q8WXF3 142 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 PNMA5Q96PV4 448 aa14.94□□□□□ -0.02
SPCS3-204ENST00000513139 MBD1Q9UIS9 605 aaPredicted RBP14.94□□□□□ -0.02
SPCS3-204ENST00000513139 URB1O60287 2271 aaKnown RBP14.93□□□□□ -0.02
SPCS3-204ENST00000513139 NPHP3-ACAD11A0A0J9YXS1 232 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 MYMKA6NI61 221 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 K7ENM7 598 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 OPHN1O60890 802 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 CFIP05156 583 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 SERPINF2P08697 491 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 HMGN5P82970 282 aaKnown RBP14.93□□□□□ -0.02
SPCS3-204ENST00000513139 EOGTQ5NDL2 527 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 ARMCX6Q7L4S7 300 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 TTC30AQ86WT1 665 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 CCDC83Q8IWF9 413 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 ADGRG2Q8IZP9 1017 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 TMEM86AQ8N2M4 240 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 ALLCQ8N6M5 410 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 TXNDC5Q8NBS9 432 aaKnown RBP14.93□□□□□ -0.02
SPCS3-204ENST00000513139 SPATA18Q8TC71 538 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 LRRC15Q8TF66 581 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 FUBP3Q96I24 572 aaKnown RBP eCLIP14.93□□□□□ -0.02
SPCS3-204ENST00000513139 TMX3Q96JJ7 454 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 ZSCAN31Q96LW9 406 aaPredicted RBP14.93□□□□□ -0.02
SPCS3-204ENST00000513139 CEP295NLQ96MC4 621 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 PKMYT1Q99640 499 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 REEP2Q9BRK0 252 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 PARVGQ9HBI0 331 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 CAPN10Q9HC96 672 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 STYXL1Q9Y6J8 313 aa14.93□□□□□ -0.02
SPCS3-204ENST00000513139 ASXL3Q9C0F0 2248 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 C2orf78A6NCI8 922 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 SGK1O00141 431 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 AP5Z1O43299 807 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 IL18RAPO95256 599 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 KLF8O95600 359 aaPredicted RBP14.92□□□□□ -0.02
SPCS3-204ENST00000513139 ITPKAP23677 461 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 GTF2BQ00403 316 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 MYL7Q01449 175 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 SLC14A1Q13336 389 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 ZC2HC1CQ53FD0 456 aaPredicted RBP14.92□□□□□ -0.02
SPCS3-204ENST00000513139 INTS6LQ5JSJ4 861 aaKnown RBP14.92□□□□□ -0.02
SPCS3-204ENST00000513139 ADALQ6DHV7 355 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 PDZD3Q86UT5 571 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 PDCL2Q8N4E4 241 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 MYCT1Q8N699 235 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 FRMD1Q8N878 549 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 CDK5RAP3Q96JB5 506 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 PNKPQ96T60 521 aa14.92□□□□□ -0.02
SPCS3-204ENST00000513139 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.92□□□□□ -0.02
SPCS3-204ENST00000513139 DNAAF2Q9NVR5 837 aaKnown RBP14.92□□□□□ -0.02
SPCS3-204ENST00000513139 DDX43Q9NXZ2 648 aaKnown RBP14.92□□□□□ -0.02
SPCS3-204ENST00000513139 BCCIPQ9P287 314 aaKnown RBP eCLIP14.92□□□□□ -0.02
SPCS3-204ENST00000513139 AGO2Q9UKV8 859 aaKnown RBP14.92□□□□□ -0.02
SPCS3-204ENST00000513139 ANTXRLA6NF34 631 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 SLC9A3R1O14745 358 aaPredicted RBP14.91□□□□□ -0.02
SPCS3-204ENST00000513139 SLC26A4O43511 780 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 TRAK2O60296 914 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 HUS1O60921 280 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 PPP1R37O75864 691 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 APODP05090 189 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 CYP17A1P05093 508 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 CD59P13987 128 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 MAGEA11P43364 429 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 TNFRSF4P43489 277 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 KIR2DL1P43626 348 aaPredicted RBP14.91□□□□□ -0.02
SPCS3-204ENST00000513139 FAM193AP78312 1265 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 ATP2C1P98194 919 aaPredicted RBP14.91□□□□□ -0.02
SPCS3-204ENST00000513139 SCAPQ12770 1279 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 TMEM119Q4V9L6 283 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 SLC36A4Q6YBV0 504 aa14.91□□□□□ -0.02
SPCS3-204ENST00000513139 SPATA2LQ8IUW3 424 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms