RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 NME7Q9Y5B8 376 aa6.92□□□□□ -1.3
KDM3B-208ENST00000512928 TICRRQ7Z2Z1 1910 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 DMDP11532 3685 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 C2orf78A6NCI8 922 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 MAPK13O15264 365 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 CHADO15335 359 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 TADA3O75528 432 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 AP1G2O75843 785 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 ASS1P00966 412 aaKnown RBP6.91□□□□□ -1.3
KDM3B-208ENST00000512928 USP17L7P0C7H9 530 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 GLULP15104 373 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 ASPAP45381 313 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 CACNA2D1P54289 1103 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 MCCD1P59942 119 aaPredicted RBP6.91□□□□□ -1.3
KDM3B-208ENST00000512928 USP46P62068 366 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 FKBP3Q00688 224 aaKnown RBP6.91□□□□□ -1.3
KDM3B-208ENST00000512928 PLCB2Q00722 1185 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 LRRC63Q05C16 580 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 FCHO2Q0JRZ9 810 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 CAMK4Q16566 473 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 NFIL3Q16649 462 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 CCDC40Q4G0X9 1142 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 ZCWPW2Q504Y3 356 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 ZNF394Q53GI3 561 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 COBLL1Q53SF7 1204 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 WDR44Q5JSH3 913 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 C1orf220Q5T0J3 134 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 KRT39Q6A163 491 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 ANKRD40Q6AI12 368 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 TRIM68Q6AZZ1 485 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 FAM35AQ86V20 835 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 CREBRFQ8IUR6 639 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 C1orf210Q8IVY1 113 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 ARL14EPQ8N8R7 260 aaPredicted RBP6.91□□□□□ -1.3
KDM3B-208ENST00000512928 C12orf29Q8N999 325 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 SLC2A14Q8TDB8 520 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 USP13Q92995 863 aaPredicted RBP6.91□□□□□ -1.3
KDM3B-208ENST00000512928 SMARCD1Q96GM5 515 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 SPATA17Q96L03 361 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 C8orf48Q96LL4 319 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 MYRFLQ96LU7 910 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 LRRC3BQ96PB8 259 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 SLITRK1Q96PX8 696 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 KCNK16Q96T55 309 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 NELL2Q99435 816 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 DDX23Q9BUQ8 820 aaKnown RBP6.91□□□□□ -1.3
KDM3B-208ENST00000512928 GTPBP4Q9BZE4 634 aaKnown RBP6.91□□□□□ -1.3
KDM3B-208ENST00000512928 NACA2Q9H009 215 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 EBF3Q9H4W6 596 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 VRTNQ9H8Y1 702 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 KIF9Q9HAQ2 790 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 DMAP1Q9NPF5 467 aaPredicted RBP6.91□□□□□ -1.3
KDM3B-208ENST00000512928 SMPD4Q9NXE4 827 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 TRPM5Q9NZQ8 1165 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 ZMYM5Q9UJ78 669 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 MAN1B1Q9UKM7 699 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 CTNND2Q9UQB3 1225 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 CACNA1HO95180 2353 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 DCHS1Q96JQ0 3298 aa6.91□□□□□ -1.3
KDM3B-208ENST00000512928 ZFHX2Q9C0A1 2572 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 NUP210Q8TEM1 1887 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 MED19A0JLT2 244 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 SPECC1L-ADORA2AF8WAN1 911 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 SCAMP3O14828 347 aaKnown RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 SLC16A3O15427 465 aaKnown RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 RTN3O95197 1032 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 FAM163BP0C2L3 166 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 FAM200BP0CF97 657 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 CD44P16070 742 aaKnown RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 HDCP19113 662 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 YWHAQP27348 245 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 GTF2H1P32780 548 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 IFNAR2P48551 515 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 PDE6CP51160 858 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 PMS1P54277 932 aaKnown RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 STX17P56962 302 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 MAP3K7CLP57077 242 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 CSTF1Q05048 431 aaKnown RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 LRMPQ12912 555 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 TAF10Q12962 218 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 LRRC32Q14392 662 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 MTF1Q14872 753 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 PON2Q15165 354 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 ITPRIPL2Q3MIP1 535 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 TSSK4Q6SA08 328 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 UNC93AQ86WB7 457 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 ADSSL1Q8N142 457 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 NUP93Q8N1F7 819 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 FBXL13Q8NEE6 735 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 GPT2Q8TD30 523 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 SH3RF2Q8TEC5 729 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 NELFBQ8WX92 580 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 NKD2Q969F2 451 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 FBXO32Q969P5 355 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 DHTKD1Q96HY7 919 aaPredicted RBP6.9□□□□□ -1.3
KDM3B-208ENST00000512928 GBP4Q96PP9 640 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 SLC22A12Q96S37 553 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 HINFPQ9BQA5 517 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 NT5C1AQ9BXI3 368 aa6.9□□□□□ -1.3
KDM3B-208ENST00000512928 C8orf33Q9H7E9 229 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms