RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CYP2D7A0A087X1C5 515 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 FCHO1O14526 889 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 PPEF2O14830 753 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 AKAP10O43572 662 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 NPSP0C0P6 89 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 CYP2A6P11509 494 aaPredicted RBP2.89□□□□□ -1.95
PDGFC-208ENST00000512711 PSG6Q00889 435 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 E2F1Q01094 437 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 TTF1Q15361 905 aaPredicted RBP2.89□□□□□ -1.95
PDGFC-208ENST00000512711 AWAT1Q58HT5 328 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 TEDDM1Q5T9Z0 273 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 KRTAP5-11Q6L8G4 156 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 KIRREL2Q6UWL6 708 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 KCTD20Q7Z5Y7 419 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 SLC15A3Q8IY34 581 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 RAVER1Q8IY67 606 aaKnown RBP2.89□□□□□ -1.95
PDGFC-208ENST00000512711 IZUMO1Q8IYV9 350 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 GALNT16Q8N428 558 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 ABHD11Q8NFV4 315 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 OSCP1Q8WVF1 389 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 ZC3H10Q96K80 434 aaKnown RBP2.89□□□□□ -1.95
PDGFC-208ENST00000512711 FCRL4Q96PJ5 515 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 PRR25Q96S07 402 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 C17orf80Q9BSJ5 609 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 TRIM54Q9BYV2 358 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 SEMA4CQ9C0C4 833 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 SMURF2Q9HAU4 748 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 NRIP3Q9NQ35 241 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 ASIC5Q9NY37 505 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 ELOVL5Q9NYP7 299 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 KLHL13Q9P2N7 655 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 SHOC2Q9UQ13 582 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 NOP58Q9Y2X3 529 aaKnown RBP2.89□□□□□ -1.95
PDGFC-208ENST00000512711 WDR17Q8IZU2 1322 aa2.89□□□□□ -1.95
PDGFC-208ENST00000512711 H3BML4 177 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 MYO1CO00159 1063 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 TJP3O95049 919 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 IGKV2-30P06310 120 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 THP07101 528 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 LRPAP1P30533 357 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 PDE6CP51160 858 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 RENBPP51606 427 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 KRT17Q04695 432 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 TBC1D25Q3MII6 688 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 Q4G0T1 1027 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 AWAT2Q6E213 333 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 SWSAP1Q6NVH7 229 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 EPM2AIP1Q7L775 607 aaPredicted RBP2.88□□□□□ -1.95
PDGFC-208ENST00000512711 ZNF804AQ7Z570 1209 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 BCDIN3DQ7Z5W3 292 aaKnown RBP2.88□□□□□ -1.95
PDGFC-208ENST00000512711 GAS2L3Q86XJ1 694 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 DENND1CQ8IV53 801 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 CNGA4Q8IV77 575 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 ZBTB34Q8NCN2 500 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 ZCRB1Q8TBF4 217 aaKnown RBP2.88□□□□□ -1.95
PDGFC-208ENST00000512711 BPIFB1Q8TDL5 484 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 DENND1AQ8TEH3 1009 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 MAML1Q92585 1016 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 CTHRC1Q96CG8 243 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 DAZAP1Q96EP5 407 aaKnown RBP2.88□□□□□ -1.95
PDGFC-208ENST00000512711 MOGAT1Q96PD6 335 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 TAAR9Q96RI9 348 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 DPCDQ9BVM2 203 aaPredicted RBP2.88□□□□□ -1.95
PDGFC-208ENST00000512711 CIPCQ9C0C6 399 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 MS4A7Q9GZW8 240 aaPredicted RBP2.88□□□□□ -1.95
PDGFC-208ENST00000512711 VPS16Q9H269 839 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 PIH1D1Q9NWS0 290 aaKnown RBP2.88□□□□□ -1.95
PDGFC-208ENST00000512711 ZNF180Q9UJW8 692 aa2.88□□□□□ -1.95
PDGFC-208ENST00000512711 POC1B-GALNT4F8VUJ3 575 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 PRPF3O43395 683 aaKnown RBP2.87□□□□□ -1.95
PDGFC-208ENST00000512711 BCAR3O75815 825 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 NTN1O95631 604 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 FGAP02671 866 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 CYP2C9P11712 490 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 VCAM1P19320 739 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 ATP5F1P24539 256 aaPredicted RBP2.87□□□□□ -1.95
PDGFC-208ENST00000512711 HOXD9P28356 352 aaPredicted RBP2.87□□□□□ -1.95
PDGFC-208ENST00000512711 NR4A2P43354 598 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 AGFG1P52594 562 aaKnown RBP2.87□□□□□ -1.95
PDGFC-208ENST00000512711 MIS18BP1Q6P0N0 1132 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 NPNTQ6UXI9 565 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 OVCH2Q7RTZ1 564 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 DAAM2Q86T65 1068 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 MPP5Q8N3R9 675 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 GALNT4Q8N4A0 578 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 OR56A3Q8NH54 315 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 IL31RAQ8NI17 732 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 MTFMTQ96DP5 389 aaKnown RBP2.87□□□□□ -1.95
PDGFC-208ENST00000512711 ZBTB45Q96K62 511 aaPredicted RBP2.87□□□□□ -1.95
PDGFC-208ENST00000512711 SNX18Q96RF0 628 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 DPH1Q9BZG8 443 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 STK32BQ9NY57 414 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 DDX56Q9NY93 547 aaKnown RBP2.87□□□□□ -1.95
PDGFC-208ENST00000512711 CPNE7Q9UBL6 633 aa2.87□□□□□ -1.95
PDGFC-208ENST00000512711 SCAF8Q9UPN6 1271 aaKnown RBP2.87□□□□□ -1.95
PDGFC-208ENST00000512711 A0A1W2PPL8 197 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 H7C1Q1 480 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 ADAM10O14672 748 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 TBX3O15119 743 aa2.86□□□□□ -1.95
PDGFC-208ENST00000512711 TBC1D4O60343 1298 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms