RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 VSTM1Q6UX27 236 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 SMYD4Q8IYR2 804 aaPredicted RBP12.82□□□□□ -0.36
CDK7-208ENST00000512687 FMR1NBQ8N0W7 255 aaPredicted RBP12.82□□□□□ -0.36
CDK7-208ENST00000512687 B3GALNT2Q8NCR0 500 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 CYP2S1Q96SQ9 504 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 ZNF518BQ9C0D4 1074 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 LMAN1LQ9HAT1 526 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 TRPC7Q9HCX4 862 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 RBM12Q9NTZ6 932 aaKnown RBP12.82□□□□□ -0.36
CDK7-208ENST00000512687 TDP1Q9NUW8 608 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 GCNT4Q9P109 453 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 HMGXB4Q9UGU5 601 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 FBXO4Q9UKT5 387 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 GVINP1Q7Z2Y8 2422 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 FRYLO94915 3013 aa12.82□□□□□ -0.36
CDK7-208ENST00000512687 PTPRZ1P23471 2315 aaPredicted RBP12.82□□□□□ -0.36
CDK7-208ENST00000512687 F8VP50 259 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 NCAM2O15394 837 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 CALUO43852 315 aaPredicted RBP12.81□□□□□ -0.36
CDK7-208ENST00000512687 AKAP3O75969 853 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 FAM163BP0C2L3 166 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 TDGF1P13385 188 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 ARSAP15289 507 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 NR2F2P24468 414 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 GRIK1P39086 918 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 AP3M2P53677 418 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 MLLT6P55198 1093 aaPredicted RBP12.81□□□□□ -0.36
CDK7-208ENST00000512687 ORC1Q13415 861 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 ZNF268Q14587 947 aaPredicted RBP12.81□□□□□ -0.36
CDK7-208ENST00000512687 PON2Q15165 354 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 MAPRE1Q15691 268 aaKnown RBP12.81□□□□□ -0.36
CDK7-208ENST00000512687 ZNF77Q15935 545 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 ZNF528Q3MIS6 628 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 ZNF667Q5HYK9 610 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 PPP1R15BQ5SWA1 713 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 Q6ZS52 159 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 SV2AQ7L0J3 742 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 GUF1Q8N442 669 aaKnown RBP12.81□□□□□ -0.36
CDK7-208ENST00000512687 ARL14EPQ8N8R7 260 aaPredicted RBP12.81□□□□□ -0.36
CDK7-208ENST00000512687 NELL1Q92832 810 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 FAM83CQ9BQN1 747 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 TTLL2Q9BWV7 592 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 C8orf33Q9H7E9 229 aaPredicted RBP12.81□□□□□ -0.36
CDK7-208ENST00000512687 KIF9Q9HAQ2 790 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDK7-208ENST00000512687 C2orf42Q9NWW7 574 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 ZMYM5Q9UJ78 669 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 ZNF292O60281 2723 aa12.81□□□□□ -0.36
CDK7-208ENST00000512687 DCHS1Q96JQ0 3298 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 SOBPA7XYQ1 873 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 TRIM66O15016 1216 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 CLSTN1O94985 981 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 HLA-DRAP01903 254 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 HOXC13P31276 330 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 PIK3CAP42336 1068 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 ASPAP45381 313 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 VAMP7P51809 220 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 ZXDBP98169 803 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 PPP3CAQ08209 521 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 BECN1Q14457 450 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 ITPRIPL2Q3MIP1 535 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 NAIF1Q69YI7 327 aaPredicted RBP12.8□□□□□ -0.36
CDK7-208ENST00000512687 DENND5BQ6ZUT9 1274 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 PAQR9Q6ZVX9 377 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 FAM35AQ86V20 835 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 RALGPS2Q86X27 583 aaPredicted RBP12.8□□□□□ -0.36
CDK7-208ENST00000512687 ADSSL1Q8N142 457 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 ENGASEQ8NFI3 743 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 ERCC4Q92889 916 aaPredicted RBP12.8□□□□□ -0.36
CDK7-208ENST00000512687 CCDC47Q96A33 483 aaKnown RBP12.8□□□□□ -0.36
CDK7-208ENST00000512687 MSANTD3Q96H12 275 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 C8orf48Q96LL4 319 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 EBF3Q9H4W6 596 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 FRMD4BQ9Y2L6 1034 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 WDR87Q6ZQQ6 2873 aa12.8□□□□□ -0.36
CDK7-208ENST00000512687 EP300Q09472 2414 aaPredicted RBP12.8□□□□□ -0.36
CDK7-208ENST00000512687 SPTBN4Q9H254 2564 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 MYO18AQ92614 2054 aaKnown RBP12.79□□□□□ -0.36
CDK7-208ENST00000512687 DMXL1Q9Y485 3027 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 TRAV19A0A0A6YYK7 116 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 MAPK13O15264 365 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 ASS1P00966 412 aaKnown RBP12.79□□□□□ -0.36
CDK7-208ENST00000512687 LMNAP02545 664 aaKnown RBP12.79□□□□□ -0.36
CDK7-208ENST00000512687 CKMP06732 381 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 ANXA13P27216 316 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 NOP14P78316 857 aaKnown RBP12.79□□□□□ -0.36
CDK7-208ENST00000512687 SATB1Q01826 763 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 FAM160A1Q05DH4 1040 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 RUNX3Q13761 415 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 CCINQ13939 588 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 MTF1Q14872 753 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 ZC3H14Q6PJT7 736 aaKnown RBP12.79□□□□□ -0.36
CDK7-208ENST00000512687 ACOT1Q86TX2 421 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 FAM186BQ8IYM0 893 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 SUMF1Q8NBK3 374 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 ZBTB44Q8NCP5 570 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 TTC16Q8NEE8 873 aa12.79□□□□□ -0.36
CDK7-208ENST00000512687 EEF2KMTQ96G04 330 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms