RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 NPHP3-ACAD11A0A0J9YXS1 232 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 ZNF263O14978 683 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 MEFVO15553 781 aaPredicted RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 ADRB2P07550 413 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 SDHBP21912 280 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 BRD2P25440 801 aaKnown RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 GDI1P31150 447 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 TNFSF9P41273 254 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 CCR2P41597 374 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 ZNF131P52739 623 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 MLLT6P55198 1093 aaPredicted RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 LILRA4P59901 499 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 POU5F1Q01860 360 aaKnown RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 SPAG1Q07617 926 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 DUSP4Q13115 394 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 GRM2Q14416 872 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 DHX8Q14562 1220 aaKnown RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 TMEM132DQ14C87 1099 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 VEPH1Q14D04 833 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 ENOX2Q16206 610 aaKnown RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 ARHGAP15Q53QZ3 475 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 SPATA1Q5VX52 437 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 ITIH5Q86UX2 942 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 METTL23Q86XA0 190 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 WFDC8Q8IUA0 241 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 MAP4K3Q8IVH8 894 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 MFSD6LQ8IWD5 586 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 KIAA2013Q8IYS2 634 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 MAML2Q8IZL2 1156 aaPredicted RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 ZSCAN18Q8TBC5 510 aaPredicted RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 CSGALNACT1Q8TDX6 532 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 RAD54LQ92698 747 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 SENP8Q96LD8 212 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 HAPLN2Q9GZV7 340 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 ASB7Q9H672 318 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 ZNF334Q9HCZ1 680 aaPredicted RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 FAM13BQ9NYF5 915 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 NCDNQ9UBB6 729 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 HSFX1Q9UBD0 423 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 DSEQ9UL01 958 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 ZMIZ1Q9ULJ6 1067 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 NDRG2Q9UN36 371 aaKnown RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 TIMM13Q9Y5L4 95 aaPredicted RBP7.77□□□□□ -1.17
USP46-208ENST00000512656 PIAS3Q9Y6X2 628 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 MYH15Q9Y2K3 1946 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 SPTBN2O15020 2390 aa7.77□□□□□ -1.17
USP46-208ENST00000512656 NOTCH4Q99466 2003 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 TPRP12270 2363 aaKnown RBP7.76□□□□□ -1.17
USP46-208ENST00000512656 HEPACAM2A8MVW5 462 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 PLCG1P19174 1290 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 PDCP20941 246 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 DDIT3P35638 169 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 VIPR2P41587 438 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 TUFMP49411 452 aaKnown RBP7.76□□□□□ -1.17
USP46-208ENST00000512656 GTF2BQ00403 316 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 PLAURQ03405 335 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 SMARCB1Q12824 385 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 MTAPQ13126 283 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 LRRC32Q14392 662 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 PUM1Q14671 1186 aaKnown RBP eCLIP7.76□□□□□ -1.17
USP46-208ENST00000512656 KARSQ15046 597 aaKnown RBP7.76□□□□□ -1.17
USP46-208ENST00000512656 POSTNQ15063 836 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 TEAD2Q15562 447 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 TAF12Q16514 161 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 C9orf57Q5W0N0 161 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 ADALQ6DHV7 355 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 JADE1Q6IE81 842 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 CENPPQ6IPU0 288 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 C16orf46Q6P387 395 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 VITQ6UXI7 678 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 DGLUCYQ7Z3D6 616 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 CACTIN-AS1Q8N1I8 211 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 THEM5Q8N1Q8 247 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 SUMF1Q8NBK3 374 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 ZBTB44Q8NCP5 570 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 SHKBP1Q8TBC3 707 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 FAM3CQ92520 227 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 LARP4BQ92615 738 aaKnown RBP7.76□□□□□ -1.17
USP46-208ENST00000512656 PSMG2Q969U7 264 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 HVCN1Q96D96 273 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 ZSWIM3Q96MP5 696 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 PGLYRP2Q96PD5 576 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 GCNAQ96QF7 691 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 CHRDQ9H2X0 955 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 ATXN3LQ9H3M9 355 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 ST6GALNAC4Q9H4F1 302 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 C8orf33Q9H7E9 229 aaPredicted RBP7.76□□□□□ -1.17
USP46-208ENST00000512656 SRA1Q9HD15 236 aaKnown RBP7.76□□□□□ -1.17
USP46-208ENST00000512656 PRMT8Q9NR22 394 aaPredicted RBP7.76□□□□□ -1.17
USP46-208ENST00000512656 BLOC1S4Q9NUP1 217 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 CCDC39Q9UFE4 941 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 ZMYM5Q9UJ78 669 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 CPSF3Q9UKF6 684 aaKnown RBP7.76□□□□□ -1.17
USP46-208ENST00000512656 RAB23Q9ULC3 237 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 C2CD2Q9Y426 696 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 MIA3Q5JRA6 1907 aa7.76□□□□□ -1.17
USP46-208ENST00000512656 ACACBO00763 2458 aa7.75□□□□□ -1.17
USP46-208ENST00000512656 DCHS1Q96JQ0 3298 aa7.75□□□□□ -1.17
USP46-208ENST00000512656 MTMR11A4FU01 709 aa7.75□□□□□ -1.17
USP46-208ENST00000512656 PRR5-ARHGAP8B1AHC4 643 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms