RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 MAP9Q49MG5 647 aa25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 BEND6Q5SZJ8 279 aaPredicted RBP25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 AADACL2Q6P093 401 aa25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 ZNF280BQ86YH2 543 aa25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 KLHL7Q8IXQ5 586 aa25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 ARFGAP1Q8N6T3 406 aa25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 PRELID2Q8N945 189 aa25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 RTP3Q9BQQ7 232 aa25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 HOMER3Q9NSC5 361 aa25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 EFR3BQ9Y2G0 817 aa25.58■■□□□ 1.69
SPOCK3-221ENST00000512648 RAD51CO43502 376 aa25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 PHF2O75151 1096 aa25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 LRCH4O75427 683 aa25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 ACAT1P24752 427 aaKnown RBP25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 BRCC3P46736 316 aa25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 DHX34Q14147 1143 aaKnown RBP25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 MDH1BQ5I0G3 518 aa25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 THEM5Q8N1Q8 247 aa25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 LRRC19Q9H756 370 aa25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 PCYOX1Q9UHG3 505 aa25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 TBX21Q9UL17 535 aa25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 HTTP42858 3142 aa25.57■■□□□ 1.68
SPOCK3-221ENST00000512648 FAM187AA6NFU0 413 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 FAM200BP0CF97 657 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 PDGFRAP16234 1089 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 RFC2P35250 354 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 ATN1P54259 1190 aaPredicted RBP25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 SLC25A11Q02978 314 aaKnown RBP25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 MAPRE1Q15691 268 aaKnown RBP25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 EFHC1Q5JVL4 640 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 PIGZQ86VD9 579 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 SCUBE3Q8IX30 993 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 ZDHHC14Q8IZN3 488 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 RXFP2Q8WXD0 754 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 SEC14L1Q92503 715 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 CASD1Q96PB1 797 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 FAM193BQ96PV7 902 aaPredicted RBP25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 PKMYT1Q99640 499 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 DDX47Q9H0S4 455 aaKnown RBP25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 CSNK1G1Q9HCP0 422 aa25.56■■□□□ 1.68
SPOCK3-221ENST00000512648 MYBPHLA2RUH7 354 aa25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 TRAPPC3O43617 180 aa25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 GLI1P08151 1106 aa25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 RARAP10276 462 aa25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 HSPA8P11142 646 aaKnown RBP25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 PTPN9P43378 593 aa25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 FNTAP49354 379 aa25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 KLF1Q13351 362 aaPredicted RBP25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 TRIM60Q495X7 471 aa25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 INTS6LQ5JSJ4 861 aaKnown RBP25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 EMC1Q8N766 993 aa25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 ZNF446Q9NWS9 450 aa25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 TIMM13Q9Y5L4 95 aaPredicted RBP25.55■■□□□ 1.68
SPOCK3-221ENST00000512648 HEXIM1O94992 359 aaKnown RBP25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 OAZ2O95190 189 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 DESP17661 470 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 SSR1P43307 286 aaKnown RBP25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 TAZQ16635 292 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 OVOS1Q6IE37 1185 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 CLEC20AQ6ZU45 233 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 NPAS4Q8IUM7 802 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 ABI1Q8IZP0 508 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 CMASQ8NFW8 434 aaPredicted RBP25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 SLCO2A1Q92959 643 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 PCED1BQ96HM7 432 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 MRPL9Q9BYD2 267 aaKnown RBP25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 OSBPL8Q9BZF1 889 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 LRFN2Q9ULH4 789 aa25.54■■□□□ 1.68
SPOCK3-221ENST00000512648 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 B4GALT3O60512 393 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 FBXO21O94952 628 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 SLC7A5Q01650 507 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 RNASELQ05823 741 aaKnown RBP25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 DAB2IPQ5VWQ8 1189 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 TRNP1Q6NT89 227 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 FAM35AQ86V20 835 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 SLITRK1Q96PX8 696 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 SYN3O14994 580 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 ITGB1P05556 798 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 TCF4P15884 667 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 IBSPP21815 317 aaPredicted RBP25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 FLT3P36888 993 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 DRG2P55039 364 aaKnown RBP25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 TCTN1Q2MV58 587 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 CCDC14Q49A88 953 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 RAB41Q5JT25 222 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 CENPIQ92674 756 aaPredicted RBP25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 MAGOHBQ96A72 148 aaKnown RBP25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 SMARCD1Q96GM5 515 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 PIWIL1Q96J94 861 aaKnown RBP25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 TMEM175Q9BSA9 504 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 MED10Q9BTT4 135 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 C11orf84Q9BUA3 381 aaPredicted RBP25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 DDX23Q9BUQ8 820 aaKnown RBP25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 AMACRQ9UHK6 382 aa25.53■■□□□ 1.68
SPOCK3-221ENST00000512648 TDRD15B5MCY1 1934 aaKnown RBP25.52■■□□□ 1.68
SPOCK3-221ENST00000512648 TCRBV7S2A1N4TA0A589 114 aa25.52■■□□□ 1.68
SPOCK3-221ENST00000512648 CLDN5O00501 218 aa25.52■■□□□ 1.68
SPOCK3-221ENST00000512648 TRUB2O95900 331 aaKnown RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms