RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 NUDT18Q6ZVK8 323 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 FILIP1Q7Z7B0 1213 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 ADGRG2Q8IZP9 1017 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 DEFB119Q8N690 84 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 KIAA1958Q8N8K9 716 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 LRRC15Q8TF66 581 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 KCNN1Q92952 543 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 CAMK1GQ96NX5 476 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 PLIN2Q99541 437 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 SCUBE2Q9NQ36 999 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 ARHGEF4Q9NR80 690 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 EHD2Q9NZN4 543 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 TRPM5Q9NZQ8 1165 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 GTF3C4Q9UKN8 822 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 FREM2Q5SZK8 3169 aa13.48□□□□□ -0.25
DDX41-215ENST00000512431 ASCC3Q8N3C0 2202 aaKnown RBP13.47□□□□□ -0.25
DDX41-215ENST00000512431 NPHP3-ACAD11A0A0J9YXS1 232 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 A0A1W2PQD8 194 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 FAM13AO94988 1023 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 ADH1CP00326 375 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 CYP17A1P05093 508 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 ACAT1P24752 427 aaKnown RBP13.47□□□□□ -0.25
DDX41-215ENST00000512431 SLC12A3P55017 1021 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 ATP2C1P98194 919 aaPredicted RBP13.47□□□□□ -0.25
DDX41-215ENST00000512431 POU5F1Q01860 360 aaKnown RBP13.47□□□□□ -0.25
DDX41-215ENST00000512431 PLEKHG6Q3KR16 790 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 CFAP221Q4G0U5 840 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 EMC10Q5UCC4 262 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 NT5DC4Q86YG4 428 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 NAXDQ8IW45 347 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 RGL4Q8IZJ4 473 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 TMEM86AQ8N2M4 240 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 PDCL2Q8N4E4 241 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 PNPLA1Q8N8W4 532 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 FAM184AQ8NB25 1140 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 GLIS3Q8NEA6 775 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 FBXO18Q8NFZ0 1043 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 OR2I1PQ8NGU4 316 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 MDM1Q8TC05 714 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 FUBP3Q96I24 572 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX41-215ENST00000512431 PNMA5Q96PV4 448 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 MMTAG2Q9BU76 263 aaKnown RBP13.47□□□□□ -0.25
DDX41-215ENST00000512431 FAM124BQ9H5Z6 455 aaPredicted RBP13.47□□□□□ -0.25
DDX41-215ENST00000512431 SUSD2Q9UGT4 822 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 PCDHB6Q9Y5E3 794 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 TSC2P49815 1807 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 KIAA1549LQ6ZVL6 1849 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 DENND4CQ5VZ89 1909 aa13.47□□□□□ -0.25
DDX41-215ENST00000512431 MYO16Q9Y6X6 1858 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 A0A0A0MRY4 1105 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 TRAK2O60296 914 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 ZNF217O75362 1048 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 IL18RAPO95256 599 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 GNSP15586 552 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 PCSK1P29120 753 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 KIR2DL1P43626 348 aaPredicted RBP13.46□□□□□ -0.25
DDX41-215ENST00000512431 GAB4Q2WGN9 574 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 HYIQ5T013 277 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 SYCP2LQ5T4T6 812 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 BTBD8Q5XKL5 378 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 C4orf50Q6ZRC1 276 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 KCNV2Q8TDN2 545 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 ZHX3Q9H4I2 956 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 PARVGQ9HBI0 331 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 AGO2Q9UKV8 859 aaKnown RBP13.46□□□□□ -0.25
DDX41-215ENST00000512431 RAXQ9Y2V3 346 aa13.46□□□□□ -0.25
DDX41-215ENST00000512431 ITPR1Q14643 2758 aa13.46□□□□□ -0.26
DDX41-215ENST00000512431 PCNX2A6NKB5 2137 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 TBC1D3BA6NDS4 549 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 ADAM23O75077 832 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 NDUFS2O75306 463 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 ABL1P00519 1130 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 KRT18P05783 430 aaKnown RBP13.45□□□□□ -0.26
DDX41-215ENST00000512431 ADH5P11766 374 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 ANXA13P27216 316 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 PPP3CCP48454 512 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 LHX1P48742 406 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 NEK4P51957 841 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 KDSRQ06136 332 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 C19orf57Q0VDD7 668 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 IL17AQ16552 155 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 ARSHQ5FYA8 562 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 SDE2Q6IQ49 451 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 TOGARAM2Q6ZUX3 1019 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 DDX42Q86XP3 938 aaKnown RBP eCLIP13.45□□□□□ -0.26
DDX41-215ENST00000512431 SFTPA1Q8IWL2 248 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 ZNF513Q8N8E2 541 aaPredicted RBP13.45□□□□□ -0.26
DDX41-215ENST00000512431 TRIML1Q8N9V2 468 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 CACTINQ8WUQ7 758 aaKnown RBP13.45□□□□□ -0.26
DDX41-215ENST00000512431 CEP295NLQ96MC4 621 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 HSPA12BQ96MM6 686 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 BBC3Q96PG8 261 aaPredicted RBP13.45□□□□□ -0.26
DDX41-215ENST00000512431 REEP2Q9BRK0 252 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 ZDHHC5Q9C0B5 715 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 ZDHHC4Q9NPG8 344 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 TBC1D14Q9P2M4 693 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 MAGEC2Q9UBF1 373 aaPredicted RBP13.45□□□□□ -0.26
DDX41-215ENST00000512431 L1RE1Q9UN81 338 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 AGAP1Q9UPQ3 857 aa13.45□□□□□ -0.26
DDX41-215ENST00000512431 R3HCC1Q9Y3T6 440 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms