RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 USP18Q9UMW8 372 aa9.68□□□□□ -0.86
CPNE4-210ENST00000512332 VGLL3A8MV65 326 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 MCF2LO15068 1137 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ATP5HO75947 161 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ATP6V1G2O95670 118 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ITGBL1O95965 494 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ITGB3P05106 788 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 NQO1P15559 274 aaKnown RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 RAP1GAPP47736 663 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 EIF3EP60228 445 aaKnown RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 PPIL2Q13356 520 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 TFDP2Q14188 446 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 SLC10A6Q3KNW5 377 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 PREPLQ4J6C6 727 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 FAM47CQ5HY64 1035 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 LCLAT1Q6UWP7 414 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 C3orf62Q6ZUJ4 267 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 FASTKD5Q7L8L6 764 aaKnown RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 CCDC125Q86Z20 511 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 FBXO16Q8IX29 292 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 EMC1Q8N766 993 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 USP6NLQ92738 828 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 OTUD5Q96G74 571 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 FRMD8Q9BZ67 464 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 RNF39Q9H2S5 420 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 PDZD7Q9H5P4 517 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 SMYD3Q9H7B4 428 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ECT2Q9H8V3 914 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 SAE1Q9UBE0 346 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ITGA11Q9UKX5 1188 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 COL1A2P08123 1366 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 DICER1Q9UPY3 1922 aaKnown RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 OTOFQ9HC10 1997 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 C2CD4BA6NLJ0 364 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 EDF1O60869 148 aaKnown RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 SPAG6O75602 509 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 CD48P09326 243 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 RBP3P10745 1247 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ALADP13716 330 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 INSRRP14616 1297 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ATP2A2P16615 1042 aaKnown RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 OSBPP22059 807 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 CA4P22748 312 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 RPA3P35244 121 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 DYNLT1P63172 113 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 RBP5P82980 135 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 MGAT5Q09328 741 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 MOGSQ13724 837 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 DPYSL3Q14195 570 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 NOMO1Q15155 1222 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ZKSCAN8Q15776 578 aaPredicted RBP9.67□□□□□ -0.86
CPNE4-210ENST00000512332 MSS51Q4VC12 460 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 BOLA3Q53S33 107 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 FNBP1LQ5T0N5 605 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ANKRD22Q5VYY1 191 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ILDR2Q71H61 639 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 CCDC91Q7Z6B0 441 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ECHDC2Q86YB7 292 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 UNC45BQ8IWX7 931 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 HPDLQ96IR7 371 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 NCAPGQ9BPX3 1015 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ADPGKQ9BRR6 497 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 ELP3Q9H9T3 547 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 CD248Q9HCU0 757 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 PHTF1Q9UMS5 762 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 USH1CQ9Y6N9 552 aa9.67□□□□□ -0.86
CPNE4-210ENST00000512332 MGAMO43451 1857 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 ZNF487B1APH4 448 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 M0QYV0 167 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 TM9SF1O15321 606 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 SPAG7O75391 227 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 FAM155BO75949 473 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 UNC5CO95185 931 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 GPD1P21695 349 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 RNASELQ05823 741 aaKnown RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 ARHGAP1Q07960 439 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 TMEM132DQ14C87 1099 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 PDK2Q15119 407 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 CYP4V2Q6ZWL3 525 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 TBC1D1Q86TI0 1168 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 CDR2LQ86X02 465 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 RFX6Q8HWS3 928 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 MAP7D3Q8IWC1 876 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 SPATA18Q8TC71 538 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 ZNF398Q8TD17 642 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 MZB1Q8WU39 189 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 COPS5Q92905 334 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 EMID1Q96A84 441 aaPredicted RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 KLHL29Q96CT2 875 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 RTP4Q96DX8 246 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 RMDN2Q96LZ7 410 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 HEXIM2Q96MH2 286 aaKnown RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 CYTH2Q99418 400 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 MAK16Q9BXY0 300 aaKnown RBP9.66□□□□□ -0.86
CPNE4-210ENST00000512332 NOD2Q9HC29 1040 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 HMGXB4Q9UGU5 601 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 PCSK1NQ9UHG2 260 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 A0A087WZ62 844 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 A0A1W2PPM1 405 aa9.66□□□□□ -0.86
CPNE4-210ENST00000512332 RBM47A0AV96 593 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms