RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 MDH1BQ5I0G3 518 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 RNF219Q5W0B1 726 aaPredicted RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 MTHFD1LQ6UB35 978 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 PDCD7Q8N8D1 485 aaKnown RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 TFB1MQ8WVM0 346 aaKnown RBP13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 TRPV6Q9H1D0 765 aa13.66□□□□□ -0.22
PCDHA4-202ENST00000512229 SOWAHBA6NEL2 793 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 FAM47DPA6NHR8 397 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 BTNL10A8MVZ5 291 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 PRRG1O14668 218 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 ASS1P00966 412 aaKnown RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 TPD52P55327 224 aaPredicted RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 POU5F1BQ06416 359 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 NFE2Q16621 373 aaPredicted RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 HGSNATQ68CP4 663 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 MFSD7Q6UXD7 560 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 TBC1D1Q86TI0 1168 aaPredicted RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 SCUBE3Q8IX30 993 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 CAVIN3Q969G5 261 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 ARL8AQ96BM9 186 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 RMDN1Q96DB5 314 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 ATXN7L3BQ96GX2 97 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 GAD1Q99259 594 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 VCX3BQ9H321 246 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 KRT82Q9NSB4 513 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 AP4E1Q9UPM8 1137 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 NUP188Q5SRE5 1749 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 LAMB4A4D0S4 1761 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 LOC102724159A0A0B4J2E5 919 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 TMEM120BA0PK00 339 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 CCDC160A6NGH7 325 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 PSMD3O43242 534 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 FBXO21O94952 628 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 GJB6O95452 261 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 RAB27AP51159 221 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 TKTL1P51854 596 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 PWP2Q15269 919 aaKnown RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 SNCBQ16143 134 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 CNGA2Q16280 664 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 TTC8Q8TAM2 541 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 SEMA4DQ92854 862 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 SERPINB12Q96P63 405 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 XPO6Q96QU8 1125 aaKnown RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 VCXQ9H320 206 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 XAB2Q9HCS7 855 aaKnown RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 MAFBQ9Y5Q3 323 aaPredicted RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 PDE4DIPQ5VU43 2346 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 SMIM10L2AP0DMW4 78 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 SMIM10L2BP0DMW5 78 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 DLK2Q6UY11 383 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 APTXQ7Z2E3 356 aaKnown RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 CNPY4Q8N129 248 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 RIBC1Q8N443 379 aaPredicted RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 PPTC7Q8NI37 304 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 TMEM169Q96HH4 297 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 PRMT1Q99873 361 aaKnown RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 DDX50Q9BQ39 737 aaKnown RBP13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 RNPEPQ9H4A4 650 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 RNF19AQ9NV58 838 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 TRPV2Q9Y5S1 764 aa13.65□□□□□ -0.22
PCDHA4-202ENST00000512229 F8VP50 259 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 MYO1CO00159 1063 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 PGK1P00558 417 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 ARF4P18085 180 aaPredicted RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 C10orf120Q5SQS8 335 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 RASSF3Q86WH2 238 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 SH3TC2Q8TF17 1288 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 TBCBQ99426 244 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 TTYH3Q9C0H2 523 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 SMYD3Q9H7B4 428 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 ALG13Q9NP73 1137 aaKnown RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 PSD3Q9NYI0 1048 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 APOBEC2Q9Y235 224 aaKnown RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 LTBP3Q9NS15 1303 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 A0A0G2JLL6 359 aaPredicted RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 PHF20L1A8MW92 1017 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 DCDC2CA8MYV0 355 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 TRPA1O75762 1119 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 SNX17Q15036 470 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 PCBP1Q15365 356 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 OVOS1Q6IE37 1185 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 PRRT2Q7Z6L0 340 aaPredicted RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 CCNYL1Q8N7R7 359 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 SLC2A14Q8TDB8 520 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 EXT2Q93063 718 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 KREMEN1Q96MU8 473 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 NTPCRQ9BSD7 190 aaKnown RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 TMEM106CQ9BVX2 250 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 DMAC2Q9NW81 257 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 C2CD2Q9Y426 696 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 ZNF263O14978 683 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 ZBTB22O15209 634 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 SLC2A3P11169 496 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 ARFIP2P53365 341 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 YWHAZP63104 245 aaKnown RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 TSTA3Q13630 321 aaPredicted RBP13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 CHSY1Q86X52 802 aa13.64□□□□□ -0.23
PCDHA4-202ENST00000512229 ZDHHC17Q8IUH5 632 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms