RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 RSPH1Q8WYR4 309 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 C18orf8Q96DM3 657 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 TOX2Q96NM4 488 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 PSMB7Q99436 277 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 NAP1L3Q99457 506 aaPredicted RBP8.54□□□□□ -1.04
HTT-209ENST00000512068 MED10Q9BTT4 135 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 WNT8AQ9H1J5 351 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 CXCL16Q9H2A7 254 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 C11orf49Q9H6J7 331 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 ST7Q9NRC1 585 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 FAM49BQ9NUQ9 324 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 ARGLU1Q9NWB6 273 aaPredicted RBP8.54□□□□□ -1.04
HTT-209ENST00000512068 TMEM161AQ9NX61 479 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 HMGXB4Q9UGU5 601 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 IP6K2Q9UHH9 426 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 TSPAN16Q9UKR8 245 aa8.54□□□□□ -1.04
HTT-209ENST00000512068 PACSIN2Q9UNF0 486 aaPredicted RBP8.54□□□□□ -1.04
HTT-209ENST00000512068 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.54□□□□□ -1.04
HTT-209ENST00000512068 GOLGA6L10A0A0M3HER8 536 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 CCDC66A2RUB6 948 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 MEIS3P2A8K0S8 358 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 C9IYK1 514 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 O00370 1275 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 CES2O00748 559 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 FANCGO15287 622 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 TRAPPC3O43617 180 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 CEP104O60308 925 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 SRGAP2O75044 1071 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 B3GAT3O94766 335 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 PDGFRBP09619 1106 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 MMP8P22894 467 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 PCSK1P29120 753 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 ADORA2BP29275 332 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 CXCR5P32302 372 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 CDH5P33151 784 aaPredicted RBP8.53□□□□□ -1.04
HTT-209ENST00000512068 RFC2P35250 354 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 CETN2P41208 172 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 CLCNKBP51801 687 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 LBX1P52954 281 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 BCAT1P54687 386 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 PSMC1P62191 440 aaKnown RBP8.53□□□□□ -1.04
HTT-209ENST00000512068 PTPROQ16827 1216 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 DENND1BQ6P3S1 775 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 LCLAT1Q6UWP7 414 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 ANKRD33Q7Z3H0 272 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 PHLDB2Q86SQ0 1253 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 NT5DC3Q86UY8 548 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 THEM5Q8N1Q8 247 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 LRRC57Q8N9N7 239 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.53□□□□□ -1.04
HTT-209ENST00000512068 DBF4BQ8NFT6 615 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 SPATA18Q8TC71 538 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 WHAMMQ8TF30 809 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 TFAP2BQ92481 460 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 ARMC5Q96C12 935 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 SENP8Q96LD8 212 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 TWNKQ96RR1 684 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 TLR10Q9BXR5 811 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 MRPL9Q9BYD2 267 aaKnown RBP8.53□□□□□ -1.04
HTT-209ENST00000512068 ELAC1Q9H777 363 aaKnown RBP8.53□□□□□ -1.04
HTT-209ENST00000512068 TMEM39AQ9NV64 488 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 ZNF358Q9NW07 568 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 L1RE1Q9UN81 338 aa8.53□□□□□ -1.04
HTT-209ENST00000512068 GOLGA8SH3BPF8 625 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 PGRMC1O00264 195 aaKnown RBP8.52□□□□□ -1.05
HTT-209ENST00000512068 CTIFO43310 598 aaKnown RBP8.52□□□□□ -1.05
HTT-209ENST00000512068 NBNO60934 754 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 TADA3O75528 432 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 UPP2O95045 317 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 IL2RAP01589 272 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 CLTBP09497 229 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 COMTP21964 271 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 MCM3P25205 808 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 ACADSBP45954 432 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 OR1G1P47890 313 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 GJA8P48165 433 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 CCL23P55773 120 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 RELBQ01201 579 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 TSPY1Q01534 308 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 TLE2Q04725 743 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 BST2Q10589 180 aaKnown RBP8.52□□□□□ -1.05
HTT-209ENST00000512068 PDCLQ13371 301 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 PIGHQ14442 188 aaPredicted RBP8.52□□□□□ -1.05
HTT-209ENST00000512068 ZNF268Q14587 947 aaPredicted RBP8.52□□□□□ -1.05
HTT-209ENST00000512068 MBTPS1Q14703 1052 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 UPP1Q16831 310 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 SWI5Q1ZZU3 235 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 PLEKHG4Q58EX7 1191 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 CYP4A22Q5TCH4 519 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 C1orf53Q5VUE5 145 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 WSCD1Q658N2 575 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 ARHGAP17Q68EM7 881 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 OR6B2Q6IFH4 312 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 DCLRE1AQ6PJP8 1040 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 NECAB2Q7Z6G3 386 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 DEFB128Q7Z7B8 93 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 SLFN11Q7Z7L1 901 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 PDCL2Q8N4E4 241 aa8.52□□□□□ -1.05
HTT-209ENST00000512068 B3GALNT2Q8NCR0 500 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms