RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 UXTQ9UBK9 157 aaPredicted RBP17.54■□□□□ 0.4
DDX41-213ENST00000512027 NDRG2Q9UN36 371 aaKnown RBP17.54■□□□□ 0.4
DDX41-213ENST00000512027 PIAS3Q9Y6X2 628 aa17.54■□□□□ 0.4
DDX41-213ENST00000512027 F5P12259 2224 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 VPS13AQ96RL7 3174 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 FAM170BA6NMN3 283 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 TRIM66O15016 1216 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 CHADO15335 359 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 STX17P56962 302 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 MCCD1P59942 119 aaPredicted RBP17.53■□□□□ 0.4
DDX41-213ENST00000512027 ENPEPQ07075 957 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 STIM1Q13586 685 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 MON1AQ86VX9 555 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 FUKQ8N0W3 1084 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 BPIFB1Q8TDL5 484 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 NELFBQ8WX92 580 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 ATOH1Q92858 354 aaPredicted RBP17.53■□□□□ 0.4
DDX41-213ENST00000512027 TNIP3Q96KP6 325 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 C8orf48Q96LL4 319 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 ARID3AQ99856 593 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 NIF3L1Q9GZT8 377 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 KRT82Q9NSB4 513 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 GTSE1Q9NYZ3 720 aa17.53■□□□□ 0.4
DDX41-213ENST00000512027 ADORA2BP29275 332 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 WEE1P30291 646 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 ANGPT1Q15389 498 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 TRIM68Q6AZZ1 485 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 TTI2Q6NXR4 508 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 CELF5Q8N6W0 485 aaKnown RBP17.52■□□□□ 0.4
DDX41-213ENST00000512027 ARL14EPQ8N8R7 260 aaPredicted RBP17.52■□□□□ 0.4
DDX41-213ENST00000512027 FBXL13Q8NEE6 735 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 SLC2A14Q8TDB8 520 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 CSGALNACT1Q8TDX6 532 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 WHAMMQ8TF30 809 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 SLC35C1Q96A29 364 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 DHTKD1Q96HY7 919 aaPredicted RBP17.52■□□□□ 0.4
DDX41-213ENST00000512027 TTLL2Q9BWV7 592 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 TDP1Q9NUW8 608 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 OBP2AQ9NY56 170 aa17.52■□□□□ 0.4
DDX41-213ENST00000512027 USP34Q70CQ2 3546 aa17.52■□□□□ 0.39
DDX41-213ENST00000512027 CACNA1IQ9P0X4 2223 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 AP1G2O75843 785 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 BEST1O76090 585 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 CKMP06732 381 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 DDX6P26196 483 aaKnown RBP eCLIP17.51■□□□□ 0.39
DDX41-213ENST00000512027 GTF2H1P32780 548 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 NUBP1P53384 320 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 INCA1Q0VD86 236 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 TAF10Q12962 218 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 ARHGAP29Q52LW3 1261 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 ZNF394Q53GI3 561 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 TXNDC11Q6PKC3 985 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 ZNF852Q6ZMS4 543 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 ALYREFQ86V81 257 aaKnown RBP17.51■□□□□ 0.39
DDX41-213ENST00000512027 CRYBG2Q8N1P7 616 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 ZMIZ2Q8NF64 920 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 SCAMP5Q8TAC9 235 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 TATDN2Q93075 761 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 JAKMIP2Q96AA8 810 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 SMOQ99835 787 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 GTPBP4Q9BZE4 634 aaKnown RBP17.51■□□□□ 0.39
DDX41-213ENST00000512027 TRPV5Q9NQA5 729 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 RAB20Q9NX57 234 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 GCNT4Q9P109 453 aa17.51■□□□□ 0.39
DDX41-213ENST00000512027 ARMCX3Q9UH62 379 aaPredicted RBP17.51■□□□□ 0.39
DDX41-213ENST00000512027 WDR87Q6ZQQ6 2873 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 ATP8B3O60423 1300 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 TRAV19A0A0A6YYK7 116 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 STX10O60499 249 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 CILPO75339 1184 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 ABL1P00519 1130 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 KPNA1P52294 538 aaPredicted RBP17.5■□□□□ 0.39
DDX41-213ENST00000512027 FZD5Q13467 585 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 CCDC40Q4G0X9 1142 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 UNC93AQ86WB7 457 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 CCDC150Q8NCX0 1101 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 FAM3CQ92520 227 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 SMARCD1Q96GM5 515 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 DMAP1Q9NPF5 467 aaPredicted RBP17.5■□□□□ 0.39
DDX41-213ENST00000512027 GKN1Q9NS71 199 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 TRPM5Q9NZQ8 1165 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 PIEZO1Q92508 2521 aa17.5■□□□□ 0.39
DDX41-213ENST00000512027 TNFRSF10BO14763 440 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 USP17L7P0C7H9 530 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 ARSAP15289 507 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 SLC5A3P53794 718 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 MAP3K7CLP57077 242 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 ZXDBP98169 803 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 LRMPQ12912 555 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 WDR44Q5JSH3 913 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 NUP93Q8N1F7 819 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 ZNF687Q8N1G0 1237 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 CEP295NLQ96MC4 621 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 CEP63Q96MT8 703 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 NT5C1AQ9BXI3 368 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 EBF3Q9H4W6 596 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 KIF9Q9HAQ2 790 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 CYP3A43Q9HB55 503 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 HPS4Q9NQG7 708 aa17.49■□□□□ 0.39
DDX41-213ENST00000512027 KIAA1468Q9P260 1216 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms