RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ABCB6Q9NP58 842 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 KCND2Q9NZV8 630 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 PTPRBP23467 1997 aa20.43■□□□□ 0.86
HMGCS1-206ENST00000511774 LEFTY2O00292 366 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 LAD1O00515 517 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 HDCP19113 662 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 RPL10AP62906 217 aaKnown RBP20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 SV2CQ496J9 727 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 FILIP1Q7Z7B0 1213 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 GPBP1Q86WP2 473 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 MYCT1Q8N699 235 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 CXorf38Q8TB03 319 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 WHAMMQ8TF30 809 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 ACBD6Q9BR61 282 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 DDX43Q9NXZ2 648 aaKnown RBP20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 ODF2LQ9ULJ1 636 aa20.42■□□□□ 0.86
HMGCS1-206ENST00000511774 USP46P62068 366 aa20.41■□□□□ 0.86
HMGCS1-206ENST00000511774 KCNB1Q14721 858 aa20.41■□□□□ 0.86
HMGCS1-206ENST00000511774 ADALQ6DHV7 355 aa20.41■□□□□ 0.86
HMGCS1-206ENST00000511774 SCN4BQ8IWT1 228 aa20.41■□□□□ 0.86
HMGCS1-206ENST00000511774 ADGRG2Q8IZP9 1017 aa20.41■□□□□ 0.86
HMGCS1-206ENST00000511774 CCDC26Q8TAB7 109 aa20.41■□□□□ 0.86
HMGCS1-206ENST00000511774 STYXL1Q9Y6J8 313 aa20.41■□□□□ 0.86
HMGCS1-206ENST00000511774 URB1O60287 2271 aaKnown RBP20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 ATP2C2O75185 946 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 ALDH1A2O94788 518 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 ADSSP30520 456 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 POLR2BP30876 1174 aaKnown RBP20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 ATP2C1P98194 919 aaPredicted RBP20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 GTF2BQ00403 316 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 DHX8Q14562 1220 aaKnown RBP20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 DHCR24Q15392 516 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 PHTF2Q8N3S3 785 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 MINDY1Q8N5J2 469 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 C1orf127Q8N9H9 656 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 SPACA7Q96KW9 195 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 LLPHQ9BRT6 129 aaKnown RBP20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 RNF38Q9H0F5 515 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 BLOC1S4Q9NUP1 217 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 BCCIPQ9P287 314 aaKnown RBP eCLIP20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 AGO2Q9UKV8 859 aaKnown RBP20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 HCN2Q9UL51 889 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 SLC6A14Q9UN76 642 aa20.4■□□□□ 0.86
HMGCS1-206ENST00000511774 TCRBV21S2A2A0A5A6 115 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 VWA3AA6NCI4 1184 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 H0Y626 953 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 TRAK2O60296 914 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 FAM13AO94988 1023 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 KAT7O95251 611 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 TRIM16O95361 564 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 SERPINF2P08697 491 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 KDSRQ06136 332 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 DUOXA1Q1HG43 343 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 CFAP221Q4G0U5 840 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 RHBDF2Q6PJF5 856 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 HDDC3Q8N4P3 179 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 PNPLA1Q8N8W4 532 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 PARVGQ9HBI0 331 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 AGAP1Q9UPQ3 857 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 KALRNO60229 2985 aa20.39■□□□□ 0.85
HMGCS1-206ENST00000511774 A0A0A0MRY4 1105 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 SH3BP5O60239 455 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 OPHN1O60890 802 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 ITGB3P05106 788 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 ZNF423Q2M1K9 1284 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 SPDYCQ5MJ68 293 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 SLC41A1Q8IVJ1 513 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 SPATA18Q8TC71 538 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 COL26A1Q96A83 441 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 ZNF560Q96MR9 790 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 PNKPQ96T60 521 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 LIMCH1Q9UPQ0 1083 aa20.38■□□□□ 0.85
HMGCS1-206ENST00000511774 KNL1Q8NG31 2342 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 GOLGA4Q13439 2230 aaKnown RBP20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 GABRDO14764 452 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 GJB3O75712 270 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 GABRG2P18507 467 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 HOXD12P35452 270 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 GFPT1Q06210 699 aaPredicted RBP20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 MCM6Q14566 821 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 FAM171BQ6P995 826 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 SPATA2LQ8IUW3 424 aaPredicted RBP20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 KCTD17Q8N5Z5 321 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 MDM1Q8TC05 714 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 POLMQ9NP87 494 aaPredicted RBP20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 DNAAF2Q9NVR5 837 aaKnown RBP20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 SMPD4Q9NXE4 827 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 SIX4Q9UIU6 781 aa20.37■□□□□ 0.85
HMGCS1-206ENST00000511774 MYMKA6NI61 221 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 ARHGAP33O14559 1287 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 PLCG1P19174 1290 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 MAGEA11P43364 429 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 ATXN3P54252 364 aaPredicted RBP20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 SLC7A9P82251 487 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 TFAMQ00059 246 aaKnown RBP20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 MYL7Q01449 175 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 RPL6Q02878 288 aaKnown RBP20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 SOWAHAQ2M3V2 549 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 EOGTQ5NDL2 527 aa20.36■□□□□ 0.85
HMGCS1-206ENST00000511774 CCNI2Q6ZMN8 369 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms