RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 OSBPL6Q9BZF3 934 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 LTB4R2Q9NPC1 389 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 GCNT4Q9P109 453 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 KIAA1468Q9P260 1216 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 ARMCX3Q9UH62 379 aaPredicted RBP12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 COQ4Q9Y3A0 265 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 PIEZO1Q92508 2521 aa12.35□□□□□ -0.43
SH3RF1-205ENST00000511421 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 FAM170BA6NMN3 283 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 CILPO75339 1184 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 CCDC130P13994 396 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 TARSP26639 723 aaKnown RBP12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 AVPR1AP37288 418 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 FZD5Q13467 585 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 ZNF268Q14587 947 aaPredicted RBP12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 ARHGAP29Q52LW3 1261 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 DCAF17Q5H9S7 520 aaPredicted RBP12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 TCERG1LQ5VWI1 586 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 CLEC17AQ6ZS10 378 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 FRMD5Q7Z6J6 570 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 ZNF687Q8N1G0 1237 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 C12orf29Q8N999 325 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 RIN3Q8TB24 985 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 FAXDC2Q96IV6 333 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 ZFYVE19Q96K21 471 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 METTL14Q9HCE5 456 aaKnown RBP12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 TDP1Q9NUW8 608 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 GREB1Q4ZG55 1949 aa12.34□□□□□ -0.43
SH3RF1-205ENST00000511421 ATP8B3O60423 1300 aa12.33□□□□□ -0.43
SH3RF1-205ENST00000511421 COL4A2P08572 1712 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 C2orf78A6NCI8 922 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 H0Y858 1186 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 TNFRSF10BO14763 440 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 MLLT6P55198 1093 aaPredicted RBP12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 UBXN2BQ14CS0 331 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 ZNF852Q6ZMS4 543 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 NUP93Q8N1F7 819 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 TRIML1Q8N9V2 468 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 CCDC150Q8NCX0 1101 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 ZMIZ2Q8NF64 920 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 SLC2A14Q8TDB8 520 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 TATDN2Q93075 761 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 CLDN23Q96B33 292 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 SMARCD1Q96GM5 515 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 CYP2S1Q96SQ9 504 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 NELL2Q99435 816 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 SMOQ99835 787 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 MED10Q9BTT4 135 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 NT5C1AQ9BXI3 368 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 KIF9Q9HAQ2 790 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 TRPC7Q9HCX4 862 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 IL37Q9NZH6 218 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 EHD2Q9NZN4 543 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 CTNND2Q9UQB3 1225 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 PIAS3Q9Y6X2 628 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 OBSL1O75147 1896 aa12.33□□□□□ -0.44
SH3RF1-205ENST00000511421 TRAV19A0A0A6YYK7 116 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 BICDL2A1A5D9 508 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 ZNF840PA6NDX5 716 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 MAN2B1O00754 1011 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 AP1G2O75843 785 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 BEST1O76090 585 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 CD58P19256 250 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 STX17P56962 302 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 PLCB2Q00722 1185 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 TAF10Q12962 218 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 PAK1Q13153 545 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 ARL14EPQ8N8R7 260 aaPredicted RBP12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 PHOX2BQ99453 314 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 HNRNPABQ99729 332 aaKnown RBP12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 ARID3AQ99856 593 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 FAM83CQ9BQN1 747 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 IRF2BPLQ9H1B7 796 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 CSNK1G1Q9HCP0 422 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 DMAP1Q9NPF5 467 aaPredicted RBP12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 GKN1Q9NS71 199 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 KRT82Q9NSB4 513 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 FAM49BQ9NUQ9 324 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 GTSE1Q9NYZ3 720 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 CACNA1IQ9P0X4 2223 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 ANAPC1Q9H1A4 1944 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 PMM2O15305 246 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 RTN3O95197 1032 aaPredicted RBP12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 USP17L7P0C7H9 530 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 PFKLP17858 780 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 HDCP19113 662 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 YWHAQP27348 245 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 SOX9P48436 509 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 PPP3CCP48454 512 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 FMO5P49326 533 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 TNK2Q07912 1038 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 ANGPT1Q15389 498 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 ZNF77Q15935 545 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 WDR44Q5JSH3 913 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 SCAMP5Q8TAC9 235 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 CSGALNACT1Q8TDX6 532 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 CYFIP2Q96F07 1278 aa12.32□□□□□ -0.44
SH3RF1-205ENST00000511421 MED15Q96RN5 788 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms