RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 RILPL2Q969X0 211 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 WDR24Q96S15 920 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 SLC38A3Q99624 504 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 CXorf36Q9H7Y0 433 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 G6PC2Q9NQR9 355 aa6.28□□□□□ -1.4
HMGB1P47-201ENST00000511281 FAM90A18PA6NE21 464 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 FAM90A16PA6NEW6 464 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 FAM90A9PA6NNJ1 464 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 FAM90A5PA8MXJ8 464 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 NPIPB6E9PJ23 425 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 DNPH1O43598 174 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 POLBP06746 335 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 CSF1RP07333 972 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 FAM90A15PP0C7V4 464 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 FAM90A14PP0C7W9 464 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 SPATA31D3P0C874 917 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 ZEB1P37275 1124 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 SEC24CP53992 1094 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 ACTR2P61160 394 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 NHLH2Q02577 135 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 FOXD4Q12950 439 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 GPS1Q13098 491 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 G3BP1Q13283 466 aaKnown RBP eCLIP6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 HLXQ14774 488 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 VMACQ2NL98 169 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 CERCAMQ5T4B2 595 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 NT5DC1Q5TFE4 455 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 NFRKBQ6P4R8 1299 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 SPATA31D4Q6ZUB0 917 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 BBS12Q6ZW61 710 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 RSRC2Q7L4I2 434 aaKnown RBP6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 POLNQ7Z5Q5 900 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 C2CD5Q86YS7 1000 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 POU5F2Q8N7G0 328 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 OR56A1Q8NGH5 318 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 RUBCNQ92622 972 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 DCLRE1CQ96SD1 692 aaKnown RBP6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 OSBPL9Q96SU4 736 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 SMOC2Q9H3U7 446 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 TMEM160Q9NX00 188 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 NDRG4Q9ULP0 352 aaKnown RBP6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 DAPP1Q9UN19 280 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 CHST2Q9Y4C5 530 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 COL15A1P39059 1388 aa6.27□□□□□ -1.41
HMGB1P47-201ENST00000511281 A0A1B0GTW7 788 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 CCDC78A2IDD5 438 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 HMX3A6NHT5 357 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 H0Y3Z8 333 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 LEFTY2O00292 366 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 CBFA2T3O75081 653 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 RASAL1O95294 804 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 HLA-DOAP06340 250 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 GYS1P13807 737 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 HK1P19367 917 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 ITGALP20701 1170 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 MSX2P35548 267 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 PRKAA2P54646 552 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 BCAT1P54687 386 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 FHL3Q13643 280 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 MAP3K21Q5TCX8 1036 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 TSHZ3Q63HK5 1081 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 MCTP1Q6DN14 999 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 TCTN3Q6NUS6 607 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 TMEM108Q6UXF1 575 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 LRRC55Q6ZSA7 311 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 SP8Q8IXZ3 490 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 FUKQ8N0W3 1084 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 D2HGDHQ8N465 521 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 PCYOX1LQ8NBM8 494 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 ABHD5Q8WTS1 349 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 PPP2R3CQ969Q6 453 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 MAELQ96JY0 434 aaKnown RBP6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 OR14A2Q96R54 314 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 SEPSECSQ9HD40 501 aaKnown RBP6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 IFT80Q9P2H3 777 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 PI4KBQ9UBF8 816 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 KCNE5Q9UJ90 142 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 NFU1Q9UMS0 254 aa6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 C19orf53Q9UNZ5 99 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P47-201ENST00000511281 PRAMEF33A0A0G2JMD5 474 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 CCDC196A0A1B0GTZ2 297 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 B4E171 279 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 PRAMEF10O60809 474 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 SRGAP2O75044 1071 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 USP1O94782 785 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 MBD4O95243 580 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 XBP1P17861 261 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 CHRM3P20309 590 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 CAPN3P20807 821 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 FGFR4P22455 802 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 ELF1P32519 619 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 TSPAN7P41732 249 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 RAP1GAPP47736 663 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 CCR5P51681 352 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 OCA2Q04671 838 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 UBE3AQ05086 875 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 CUL4BQ13620 913 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 DYRK1AQ13627 763 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 CCNIQ14094 377 aa6.25□□□□□ -1.41
HMGB1P47-201ENST00000511281 E2F2Q14209 437 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms