RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	GKN1	Q9NS71	199 aa		12.84	□□□□□ -0.35
CHFR-208	ENST00000511001	TDP1	Q9NUW8	608 aa		12.84	□□□□□ -0.35
CHFR-208	ENST00000511001	C2orf78	A6NCI8	922 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	OTOL1	A6NHN0	477 aa	Predicted RBP	12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	IKBKB	O14920	756 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	TRIM66	O15016	1216 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	KIF20A	O95235	890 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	ASS1	P00966	412 aa	Known RBP	12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	HLA-DRA	P01903	254 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	TRIM49	P0CI25	452 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	TRIM49C	P0CI26	452 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	KPNA1	P52294	538 aa	Predicted RBP	12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	NOP14	P78316	857 aa	Known RBP	12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	CSTF1	Q05048	431 aa	Known RBP	12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	FAM160A1	Q05DH4	1040 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	PPP3CA	Q08209	521 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	USP4	Q13107	963 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	ZNF77	Q15935	545 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	TRIM68	Q6AZZ1	485 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	SPOPL	Q6IQ16	392 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	TSSK4	Q6SA08	328 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	MAMSTR	Q6ZN01	415 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	DENND5B	Q6ZUT9	1274 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	ERMP1	Q7Z2K6	904 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	RALGPS2	Q86X27	583 aa	Predicted RBP	12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	ARL14EP	Q8N8R7	260 aa	Predicted RBP	12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	SEMA4A	Q9H3S1	761 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	TRPC7	Q9HCX4	862 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	RBM12	Q9NTZ6	932 aa	Known RBP	12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	FRMD4B	Q9Y2L6	1034 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	EML5	Q05BV3	1969 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	CACNA1B	Q00975	2339 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	DMXL1	Q9Y485	3027 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	WDR87	Q6ZQQ6	2873 aa		12.83	□□□□□ -0.36
CHFR-208	ENST00000511001	ZNF292	O60281	2723 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	TRAV19	A0A0A6YYK7	116 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	ARSA	P15289	507 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	TCF3	P15923	654 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	ANXA13	P27216	316 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	ZXDB	P98169	803 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	ENPEP	Q07075	957 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	RUNX3	Q13761	415 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	MTF1	Q14872	753 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	PON2	Q15165	354 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	SGSM1	Q2NKQ1	1148 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	ITPRIPL2	Q3MIP1	535 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	C1orf228	Q6PIY5	440 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	INTS8	Q75QN2	995 aa	Known RBP	12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	FAM35A	Q86V20	835 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	FAM186B	Q8IYM0	893 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	ADSSL1	Q8N142	457 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	ZBTB44	Q8NCP5	570 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	IER2	Q9BTL4	223 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	ELOVL4	Q9GZR5	314 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	EBF3	Q9H4W6	596 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	APOBEC3G	Q9HC16	384 aa	Known RBP	12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	THG1L	Q9NWX6	298 aa	Known RBP	12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	HMGXB4	Q9UGU5	601 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	GPR179	Q6PRD1	2367 aa		12.82	□□□□□ -0.36
CHFR-208	ENST00000511001	MYO18A	Q92614	2054 aa	Known RBP	12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	LILRB5	O75023	590 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	LMNA	P02545	664 aa	Known RBP	12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	CKM	P06732	381 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	USP17L7	P0C7H9	530 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	PSMC2	P35998	433 aa	Known RBP	12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	PIK3CA	P42336	1068 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	PRCP	P42785	496 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	ASPA	P45381	313 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	GCLM	P48507	274 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	SATB1	Q01826	763 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	ADAM9	Q13443	819 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	CCIN	Q13939	588 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	EDRF1	Q3B7T1	1238 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	ZC3H14	Q6PJT7	736 aa	Known RBP	12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	ACOT1	Q86TX2	421 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	FUK	Q8N0W3	1084 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	ZMIZ2	Q8NF64	920 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	SPATA20	Q8TB22	786 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	TAS1R2	Q8TE23	839 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	TAF4B	Q92750	862 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	ERCC4	Q92889	916 aa	Predicted RBP	12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	KCNK16	Q96T55	309 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	TRPM5	Q9NZQ8	1165 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	ARHGAP26	Q9UNA1	814 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	SPAG17	Q6Q759	2223 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	RALGAPA1	Q6GYQ0	2036 aa		12.81	□□□□□ -0.36
CHFR-208	ENST00000511001	ZNF840P	A6NDX5	716 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	TNFRSF10B	O14763	440 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	OLFM2	O95897	454 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	PFKL	P17858	780 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	HDC	P19113	662 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	RPL13	P26373	211 aa	Known RBP	12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	NDST1	P52848	882 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	TAF10	Q12962	218 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	ORC1	Q13415	861 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	LRRC32	Q14392	662 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	EML3	Q32P44	896 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	COBLL1	Q53SF7	1204 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001		Q6ZS52	159 aa		12.8	□□□□□ -0.36
CHFR-208	ENST00000511001	ZC3H3	Q8IXZ2	948 aa	Known RBP	12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms