RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CAPN9O14815 690 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 TSPAN3O60637 253 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 GLRX3O76003 335 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 FBXO21O94952 628 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 POP4O95707 220 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 SERPINC1P01008 464 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 OPN1MWP04001 364 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 OPN1MW2P0DN77 364 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 OPN1MW3P0DN78 364 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 TROVE2P10155 538 aaKnown RBP eCLIP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 COL6A2P12110 1019 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 CKBP12277 381 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 PDGFRAP16234 1089 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 HDCP19113 662 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 SFPQP23246 707 aaKnown RBP eCLIP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 DNAJB1P25685 340 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 PSMC4P43686 418 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 MTIF2P46199 727 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 KCNJ6P48051 423 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 IFNAR2P48551 515 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 ARFIP1P53367 373 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 PLTPP55058 493 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 GPR85P60893 370 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 GRSF1Q12849 480 aaKnown RBP eCLIP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 TRAP1Q12931 704 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 CDC16Q13042 620 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 RASGRF1Q13972 1273 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 FRG1Q14331 258 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 FUT11Q495W5 492 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 CEP55Q53EZ4 464 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 CREB3L3Q68CJ9 461 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 THOC7Q6I9Y2 204 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 CYB5RLQ6IPT4 315 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 RAB12Q6IQ22 244 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 KLC3Q6P597 504 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 SASS6Q6UVJ0 657 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 MRPL10Q7Z7H8 261 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 ADGRE4PQ86SQ3 457 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 SYTL1Q8IYJ3 562 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 SCYL3Q8IZE3 742 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 C3orf20Q8ND61 904 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 OR52K1Q8NGK4 314 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC110Q8TBZ0 833 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 ARHGAP45Q92619 1136 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 CENPIQ92674 756 aaPredicted RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 NINJ1Q92982 152 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 TTC17Q96AE7 1141 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 INTS12Q96CB8 462 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 CDCA5Q96FF9 252 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 ARL5BQ96KC2 179 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 C16orf45Q96MC5 204 aaPredicted RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 CRB3Q9BUF7 120 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 TOR3AQ9H497 397 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 TTC12Q9H892 705 aaPredicted RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 A1CFQ9NQ94 594 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 PLSCR4Q9NRQ2 329 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 TRMT13Q9NUP7 481 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 BTG4Q9NY30 223 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 RGL1Q9NZL6 768 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 MTRF1LQ9UGC7 380 aaKnown RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 ATPIF1Q9UII2 106 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 GPR34Q9UPC5 381 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 NR2E1Q9Y466 385 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 ZFP37Q9Y6Q3 630 aaPredicted RBP4.85□□□□□ -1.63
NIPBL-206ENST00000509429 MAP3K19Q56UN5 1328 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 NCOA2Q15596 1464 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 ARHGEF11O15085 1522 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 UGGT2Q9NYU1 1516 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 TONSLQ96HA7 1378 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 SPATA31A6Q5VVP1 1343 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 TCRBV5S2A0A599 114 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 FAM86C2PA6NEL3 165 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 RRN3P2A6NIE6 340 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 GSG1L2A8MUP6 293 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CAPN14A8MX76 684 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 B4E171 279 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 NDUFAB1O14561 156 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 PDPK1O15530 556 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 SLC22A3O75751 556 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CKMP06732 381 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 PDHA1P08559 390 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 DLATP10515 647 aaKnown RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 EPB41P11171 864 aaKnown RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 SCG2P13521 617 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 IDO1P14902 403 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 PRKAR2BP31323 418 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 FNTAP49354 379 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 ALDH5A1P51649 535 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 TKTL1P51854 596 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 AP3M2P53677 418 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 AK2P54819 239 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 CDK17Q00537 523 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 BEX3Q00994 111 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 ITKQ08881 620 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 BTG3Q14201 252 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 SPARCL1Q14515 664 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 MXD4Q14582 209 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-206ENST00000509429 STK11Q15831 433 aa4.84□□□□□ -1.63
NIPBL-206ENST00000509429 MINDY4Q4G0A6 757 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms