RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 PCDHA13Q9Y5I0 950 aa2.83□□□□□ -1.96
XRCC4-204ENST00000509268 A0A087WYN8 130 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 ID4P47928 161 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 GAS1P54826 345 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 DDR1Q08345 913 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 KEAP1Q14145 624 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 MANEAQ5SRI9 462 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 BCDIN3DQ7Z5W3 292 aaKnown RBP2.82□□□□□ -1.96
XRCC4-204ENST00000509268 NUDCD2Q8WVJ2 157 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 ATG4AQ8WYN0 398 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 RAB24Q969Q5 203 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 R3HDM4Q96D70 268 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 ZNF277Q9NRM2 450 aaPredicted RBP2.82□□□□□ -1.96
XRCC4-204ENST00000509268 CCM2LQ9NUG4 571 aaPredicted RBP2.82□□□□□ -1.96
XRCC4-204ENST00000509268 MRPS18AQ9NVS2 196 aaKnown RBP2.82□□□□□ -1.96
XRCC4-204ENST00000509268 DNMT3BQ9UBC3 853 aaKnown RBP2.82□□□□□ -1.96
XRCC4-204ENST00000509268 SERTAD3Q9UJW9 196 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 SSX2IPQ9Y2D8 614 aa2.82□□□□□ -1.96
XRCC4-204ENST00000509268 TRIP12Q14669 1992 aaPredicted RBP2.82□□□□□ -1.96
XRCC4-204ENST00000509268 KIF20AO95235 890 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 RARBP10826 455 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 SP2Q02086 613 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 BMS1Q14692 1282 aaKnown RBP2.81□□□□□ -1.96
XRCC4-204ENST00000509268 SF3B4Q15427 424 aaKnown RBP eCLIP2.81□□□□□ -1.96
XRCC4-204ENST00000509268 CCDC144BQ3MJ40 725 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 RNASE12Q5GAN4 147 aaKnown RBP2.81□□□□□ -1.96
XRCC4-204ENST00000509268 TMTC4Q5T4D3 741 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 PPP4R3AQ6IN85 833 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 NOP9Q86U38 636 aaKnown RBP2.81□□□□□ -1.96
XRCC4-204ENST00000509268 SFTPA1Q8IWL2 248 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 SPEM1Q8N4L4 309 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 ATP2A3Q93084 1043 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 PTDSS2Q9BVG9 487 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 ASIC5Q9NY37 505 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 MAFFQ9ULX9 164 aa2.81□□□□□ -1.96
XRCC4-204ENST00000509268 F2RL2O00254 374 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 ERC2O15083 957 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 SPTLC2O15270 562 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 FGF2P09038 288 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 AGXTP21549 392 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 HSF1Q00613 529 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 TKFCQ3LXA3 575 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 LAYNQ6UX15 382 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 SPATA2LQ8IUW3 424 aaPredicted RBP2.8□□□□□ -1.96
XRCC4-204ENST00000509268 SOCS4Q8WXH5 440 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 APPBP2Q92624 585 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 WBP2Q969T9 261 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 GPATCH3Q96I76 525 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 CLPTM1LQ96KA5 538 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 PIF1Q9H611 641 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 AGAP1Q9UPQ3 857 aa2.8□□□□□ -1.96
XRCC4-204ENST00000509268 TLDC2A0PJX2 215 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 SYF2O95926 243 aaKnown RBP2.79□□□□□ -1.96
XRCC4-204ENST00000509268 MT-CO3P00414 261 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 RPLP2P05387 115 aaKnown RBP2.79□□□□□ -1.96
XRCC4-204ENST00000509268 RRP1P56182 461 aaKnown RBP2.79□□□□□ -1.96
XRCC4-204ENST00000509268 LOXL3P58215 753 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 B4GALNT1Q00973 533 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 KIF22Q14807 665 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 ZNF750Q32MQ0 723 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 SLC9C1Q4G0N8 1177 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 FAM160B1Q5W0V3 765 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 DDX46Q7L014 1031 aaKnown RBP2.79□□□□□ -1.96
XRCC4-204ENST00000509268 USP37Q86T82 979 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 SLC25A28Q96A46 364 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 MED30Q96HR3 178 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 DMRTA2Q96SC8 542 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 CD93Q9NPY3 652 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 ICAM5Q9UMF0 924 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 TMA7Q9Y2S6 64 aaKnown RBP2.79□□□□□ -1.96
XRCC4-204ENST00000509268 TBX22Q9Y458 520 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 SBNO2Q9Y2G9 1366 aa2.79□□□□□ -1.96
XRCC4-204ENST00000509268 PRSS29PA6NIE9 313 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 MARCH6O60337 910 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 SOCS5O75159 536 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 ATXN1LP0C7T5 689 aaKnown RBP2.78□□□□□ -1.96
XRCC4-204ENST00000509268 RHCEP18577 417 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 IL6STP40189 918 aaPredicted RBP2.78□□□□□ -1.96
XRCC4-204ENST00000509268 KCNJ4P48050 445 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 BOP1Q14137 746 aaKnown RBP2.78□□□□□ -1.96
XRCC4-204ENST00000509268 E2F2Q14209 437 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 EGFLAMQ63HQ2 1017 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 SDE2Q6IQ49 451 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.78□□□□□ -1.96
XRCC4-204ENST00000509268 FBXL14Q8N1E6 418 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 DPCDQ9BVM2 203 aaPredicted RBP2.78□□□□□ -1.96
XRCC4-204ENST00000509268 C14orf119Q9NWQ9 140 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 A0A087X0B3 334 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 ZNF432O94892 652 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 MALP21145 153 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 FPR3P25089 353 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 LTBQ06643 244 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 ARHGAP40Q5TG30 622 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 B4GALNT4Q76KP1 1039 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 CERS3Q8IU89 383 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 AHCYL2Q96HN2 611 aaKnown RBP2.78□□□□□ -1.96
XRCC4-204ENST00000509268 SLC2A13Q96QE2 648 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 TUBB6Q9BUF5 446 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 VTA1Q9NP79 307 aa2.78□□□□□ -1.96
XRCC4-204ENST00000509268 AMFRQ9UKV5 643 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms