RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 SCYL2Q6P3W7 929 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 XYLT1Q86Y38 959 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 NKD2Q969F2 451 aaPredicted RBP11.49□□□□□ -0.57
SEC31A-228ENST00000509142 L3MBTL3Q96JM7 780 aaPredicted RBP11.49□□□□□ -0.57
SEC31A-228ENST00000509142 ARHGEF3Q9NR81 526 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 DPP3Q9NY33 737 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 CLEC11AQ9Y240 323 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 H3BRB1 525 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 MCF2LO15068 1137 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 CILPO75339 1184 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 SPAG7O75391 227 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 IL1R2P27930 398 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 EPHX2P34913 555 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 HIF1AQ16665 826 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 SLC10A6Q3KNW5 377 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 FAM47EQ6ZV65 393 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 PCGF5Q86SE9 256 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 ANKMY2Q8IV38 441 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 SHCBP1Q8NEM2 672 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 DENND1AQ8TEH3 1009 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 TUT1Q9H6E5 874 aaKnown RBP11.49□□□□□ -0.57
SEC31A-228ENST00000509142 EBF2Q9HAK2 575 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 SLCO1B3Q9NPD5 702 aa11.49□□□□□ -0.57
SEC31A-228ENST00000509142 RPSAP08865 295 aaKnown RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 MIPP30301 263 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 ELF1P32519 619 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 NDST1P52848 882 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 RIPK1Q13546 671 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 PPP1R21Q6ZMI0 780 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 RELL1Q8IUW5 271 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 FNIP1Q8TF40 1166 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 PYROXD1Q8WU10 500 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 NFKBIZQ9BYH8 718 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 MIS12Q9H081 205 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 BARX2Q9UMQ3 279 aaPredicted RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 USP18Q9UMW8 372 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 GRAP2O75791 330 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 PDGFRAP16234 1089 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 DESP17661 470 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 GBP2P32456 591 aaPredicted RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 CTCFP49711 727 aaPredicted RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 CDH6P55285 790 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 EIF3EP60228 445 aaKnown RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 OASLQ15646 514 aaKnown RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 N4BP2L2Q92802 583 aaPredicted RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 NT5C1AQ9BXI3 368 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 FAM49AQ9H0Q0 323 aaPredicted RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 VTA1Q9NP79 307 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 SHOC2Q9UQ13 582 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 PTPRFP10586 1907 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 PRPSAP2O60256 369 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 ASMTLO95671 621 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 HMGCRP04035 888 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 PTPN7P35236 360 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 RGS7P49802 495 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 BASP1P80723 227 aaKnown RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 POU5F1BQ06416 359 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 BBS12Q6ZW61 710 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 USP50Q70EL3 339 aaPredicted RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 RIBC1Q8N443 379 aaPredicted RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 SPON1Q9HCB6 807 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.48□□□□□ -0.57
SEC31A-228ENST00000509142 ARL2BPQ9Y2Y0 163 aa11.48□□□□□ -0.57
SEC31A-228ENST00000509142 WDR90Q96KV7 1748 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 SUN1O94901 812 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 ABHD2P08910 425 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 CD48P09326 243 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 RBP3P10745 1247 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 YARSP54577 528 aaKnown RBP11.47□□□□□ -0.57
SEC31A-228ENST00000509142 ARL4CP56559 192 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 IL9RQ01113 521 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 SLC25A11Q02978 314 aaKnown RBP11.47□□□□□ -0.57
SEC31A-228ENST00000509142 TMEM62Q0P6H9 643 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 MTM1Q13496 603 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 KRT81Q14533 505 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 MTFR1Q15390 333 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 SEPT7Q16181 437 aaKnown RBP11.47□□□□□ -0.57
SEC31A-228ENST00000509142 PKN2Q16513 984 aaKnown RBP11.47□□□□□ -0.57
SEC31A-228ENST00000509142 FAM187BQ17R55 369 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 DARS2Q6PI48 645 aaKnown RBP11.47□□□□□ -0.57
SEC31A-228ENST00000509142 ILDR2Q71H61 639 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 PALM2Q8IXS6 379 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 KIAA0319LQ8IZA0 1049 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 SLC35B2Q8TB61 432 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 MAGEB18Q96M61 343 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 SMC6Q96SB8 1091 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 WDR83Q9BRX9 315 aaKnown RBP11.47□□□□□ -0.57
SEC31A-228ENST00000509142 RXFP1Q9HBX9 757 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 ITGA11Q9UKX5 1188 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 EFR3BQ9Y2G0 817 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 PHBP35232 272 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 ATP11AP98196 1134 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 NR1H3Q13133 447 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 BBS9Q3SYG4 887 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 MTHFD1LQ6UB35 978 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 TRABD2AQ86V40 505 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 ZC3H18Q86VM9 953 aaKnown RBP11.47□□□□□ -0.57
SEC31A-228ENST00000509142 PPIL6Q8IXY8 311 aa11.47□□□□□ -0.57
SEC31A-228ENST00000509142 FAM71DQ8N9W8 422 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms