RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FTHL17Q9BXU8 183 aa6.01□□□□□ -1.45
HMGB1P44-201ENST00000508597 FAM49AQ9H0Q0 323 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P44-201ENST00000508597 POLR3FQ9H1D9 316 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P44-201ENST00000508597 CHST12Q9NRB3 414 aa6.01□□□□□ -1.45
HMGB1P44-201ENST00000508597 RMND1Q9NWS8 449 aa6.01□□□□□ -1.45
HMGB1P44-201ENST00000508597 DACT1Q9NYF0 836 aa6.01□□□□□ -1.45
HMGB1P44-201ENST00000508597 CGGBP1Q9UFW8 167 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P44-201ENST00000508597 CDY2AQ9Y6F7 541 aa6.01□□□□□ -1.45
HMGB1P44-201ENST00000508597 TANC1Q9C0D5 1861 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 A0A087WWV3 80 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 A0A087WZ62 844 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 K7ERI5 159 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 RPS6KA5O75582 802 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 RHOBTB3O94955 611 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 CHRNA1P02708 482 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 VTNP04004 478 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 CD3EP07766 207 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 IDEP14735 1019 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 DARSP14868 501 aaKnown RBP6□□□□□ -1.45
HMGB1P44-201ENST00000508597 SDHBP21912 280 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 NPTX2P47972 431 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 NCKAP1LP55160 1127 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 PEX3P56589 373 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 SNRPFP62306 86 aaKnown RBP6□□□□□ -1.45
HMGB1P44-201ENST00000508597 ASIC1P78348 528 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 STRN3Q13033 797 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 SQSTM1Q13501 440 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 CAPSQ13938 189 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 DHX8Q14562 1220 aaKnown RBP6□□□□□ -1.45
HMGB1P44-201ENST00000508597 HSP90AA2PQ14568 343 aaPredicted RBP6□□□□□ -1.45
HMGB1P44-201ENST00000508597 MAPK6Q16659 721 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 PLEKHG4Q58EX7 1191 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 HERC4Q5GLZ8 1057 aaPredicted RBP6□□□□□ -1.45
HMGB1P44-201ENST00000508597 FBXO47Q5MNV8 452 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 NT5DC1Q5TFE4 455 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 TSHZ1Q6ZSZ6 1077 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 ZNF720Q7Z2F6 126 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 APBB1IPQ7Z5R6 666 aaPredicted RBP6□□□□□ -1.45
HMGB1P44-201ENST00000508597 ZNF227Q86WZ6 799 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 DAW1Q8N136 415 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 MYCT1Q8N699 235 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 TRIML1Q8N9V2 468 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 RNF149Q8NC42 400 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 TET1Q8NFU7 2136 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 SPATA20Q8TB22 786 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 LRRC15Q8TF66 581 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 RSPH1Q8WYR4 309 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 SEPT8Q92599 483 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 CCDC51Q96ER9 411 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 SCLT1Q96NL6 688 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 LBHD1Q9BQE6 289 aaPredicted RBP6□□□□□ -1.45
HMGB1P44-201ENST00000508597 FDXACB1Q9BRP7 624 aaPredicted RBP6□□□□□ -1.45
HMGB1P44-201ENST00000508597 IFT122Q9HBG6 1241 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 KMT5AQ9NQR1 393 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 ARHGEF4Q9NR80 690 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 PANK4Q9NVE7 773 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 PRMT7Q9NVM4 692 aaPredicted RBP6□□□□□ -1.45
HMGB1P44-201ENST00000508597 ARHGAP28Q9P2N2 729 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 EXOC7Q9UPT5 735 aa6□□□□□ -1.45
HMGB1P44-201ENST00000508597 GPR55Q9Y2T6 319 aaPredicted RBP6□□□□□ -1.45
HMGB1P44-201ENST00000508597 UBE4BO95155 1302 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 A0A1W2PQU0 124 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 TRIM43BA6NCK2 446 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 LRRIQ4A6NIV6 560 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 CCDC169A6NNP5 214 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 ACKR2O00590 384 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 EIF3DO15371 548 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 FGF10O15520 208 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 PAX4O43316 350 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 KLRC4O43908 158 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 BAIAP3O94812 1187 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 ERLIN2O94905 339 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 LETM1O95202 739 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 PIGRP01833 764 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 CAPNS1P04632 268 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 RPN1P04843 607 aaKnown RBP5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 ITGAVP06756 1048 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 SRGAP2CP0DJJ0 459 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 ACTN1P12814 892 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 ZSCAN20P17040 1043 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 CYP2C18P33260 490 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 SARSP49591 514 aaKnown RBP5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 GTF2BQ00403 316 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 POU5F1Q01860 360 aaKnown RBP5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 FPGSQ05932 587 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 COASYQ13057 564 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 DRP2Q13474 957 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 CUL4BQ13620 913 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 NR0B2Q15466 257 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 MLANAQ16655 118 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 KIZQ2M2Z5 673 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 KLHL40Q2TBA0 621 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 COBLL1Q53SF7 1204 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 CT47A1Q5JQC4 288 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 FAM26FQ5R3K3 315 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 ZNF648Q5T619 568 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 CNKSR3Q6P9H4 555 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 PSRC1Q6PGN9 363 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 CEP128Q6ZU80 1094 aa5.99□□□□□ -1.45
HMGB1P44-201ENST00000508597 MAEAQ7L5Y9 396 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms