RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 PARS2Q7L3T8 475 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 XAGE5Q8WWM1 108 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 SUCLG2Q96I99 432 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 MACROD1Q9BQ69 325 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 INO80BQ9C086 356 aaPredicted RBP6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 FLRT1Q9NZU1 646 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 CPNE7Q9UBL6 633 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 G3BP2Q9UN86 482 aaKnown RBP6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 TBC1D30Q9Y2I9 924 aa6.52□□□□□ -1.37
TOPBP1-206ENST00000508524 CFAP69A5D8W1 941 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 TRIM43BA6NCK2 446 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 DNAJC9-AS1A6NH13 148 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 VNN1O95497 513 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 LATS1O95835 1130 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 CELA2AP08217 269 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 CDK4P11802 303 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 SUMO3P55854 103 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 TPTEP56180 551 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 SLC10A2Q12908 348 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 ZDHHC24Q6UX98 284 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 IZUMO1Q8IYV9 350 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 TMEM171Q8WVE6 324 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 TRIM43Q96BQ3 446 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 FAM204AQ9H8W3 233 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 A1CFQ9NQ94 594 aaKnown RBP6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 TCEAL9Q9UHQ7 104 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 PAXBP1Q9Y5B6 917 aa6.51□□□□□ -1.37
TOPBP1-206ENST00000508524 FNDC1Q4ZHG4 1894 aaPredicted RBP6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 TISP43B9A030 160 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 NPSP0C0P6 89 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 LMO1P25800 156 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 ABCG1P45844 678 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 PRKAG1P54619 331 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 CYP1B1Q16678 543 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 PTCHD3Q3KNS1 767 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 SLC9A4Q6AI14 798 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 NAPRTQ6XQN6 538 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 PPP2R3CQ969Q6 453 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 NMD3Q96D46 503 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 THAP7Q9BT49 309 aaPredicted RBP6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 XPNPEP3Q9NQH7 507 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 TRMT13Q9NUP7 481 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 TPCN1Q9ULQ1 816 aa6.5□□□□□ -1.37
TOPBP1-206ENST00000508524 MBD3L4A6NDZ8 208 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 MBD3L3A6NE82 208 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 ISM1B1AKI9 464 aa6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 MARCH6O60337 910 aa6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 SLC44A4Q53GD3 710 aa6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 CERCAMQ5T4B2 595 aa6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 ZNF66Q6ZN08 573 aa6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 CAND1Q86VP6 1230 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 ANKRD13AQ8IZ07 590 aa6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 MYO1HQ8N1T3 1032 aa6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 TSR2Q969E8 191 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 SPSB4Q96A44 273 aa6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 LENG8Q96PV6 779 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 GBA2Q9HCG7 927 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 ZSCAN32Q9NX65 697 aa6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 CDY1Q9Y6F8 540 aa6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 SETD1BQ9UPS6 1966 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-206ENST00000508524 VSTM5A8MXK1 200 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 PYCARD-AS1I3L0S3 204 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 SMIM22K7EJ46 135 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 PDE8BO95263 885 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 BRAFP15056 766 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 CACNB3P54284 484 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 HOXA4Q00056 320 aaPredicted RBP6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 GRM1Q13255 1194 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 GRM3Q14832 879 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 CNGA2Q16280 664 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 PRAMEF17Q5VTA0 474 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 KIAA1614Q5VZ46 1190 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 DPY19L3Q6ZPD9 716 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 CHST15Q7LFX5 561 aaPredicted RBP6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 FAM156AQ8NDB6 213 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 CYP2W1Q8TAV3 490 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 LRTOMTQ8WZ04 291 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 C17orf80Q9BSJ5 609 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 BHMT2Q9H2M3 363 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 SACM1LQ9NTJ5 587 aa6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 DNMT3BQ9UBC3 853 aaKnown RBP6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 AFF4Q9UHB7 1163 aaKnown RBP6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 CCNL1Q9UK58 526 aaPredicted RBP6.48□□□□□ -1.37
TOPBP1-206ENST00000508524 FER1L4A9Z1Z3 1794 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 TPP1O14773 563 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 ZBED1O96006 694 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 HRGP04196 525 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 KLRC1P26715 233 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 TUBA4AP68366 448 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 E2F1Q01094 437 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 GBX1Q14549 363 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 POLD3Q15054 466 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 C3orf38Q5JPI3 329 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 RNF220Q5VTB9 566 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 KIRREL2Q6UWL6 708 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 TRIM72Q6ZMU5 477 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 SRGAP1Q7Z6B7 1085 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 VGLL2Q8N8G2 317 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 ABHD11Q8NFV4 315 aa6.47□□□□□ -1.37
TOPBP1-206ENST00000508524 DNAJB14Q8TBM8 379 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms