RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CILPO75339 1184 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 USP17L7P0C7H9 530 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 MARSP56192 900 aaKnown RBP21.11■□□□□ 0.97
SFXN1-209ENST00000508290 YWHAEP62258 255 aaKnown RBP21.11■□□□□ 0.97
SFXN1-209ENST00000508290 ACOT1Q86TX2 421 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 CCDC105Q8IYK2 499 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 NUP93Q8N1F7 819 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 MAB21L3Q8N8X9 362 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 MLKLQ8NB16 471 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 PJA1Q8NG27 643 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 CSGALNACT1Q8TDX6 532 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 DUSP9Q99956 384 aaKnown RBP21.11■□□□□ 0.97
SFXN1-209ENST00000508290 C8orf33Q9H7E9 229 aaPredicted RBP21.11■□□□□ 0.97
SFXN1-209ENST00000508290 APOBEC3GQ9HC16 384 aaKnown RBP21.11■□□□□ 0.97
SFXN1-209ENST00000508290 RAPGEFL1Q9UHV5 662 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 CTNND2Q9UQB3 1225 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 KMT2EQ8IZD2 1858 aa21.11■□□□□ 0.97
SFXN1-209ENST00000508290 TBXAS1P24557 533 aaPredicted RBP21.1■□□□□ 0.97
SFXN1-209ENST00000508290 IER5LQ5T953 404 aa21.1■□□□□ 0.97
SFXN1-209ENST00000508290 FUKQ8N0W3 1084 aa21.1■□□□□ 0.97
SFXN1-209ENST00000508290 KIAA1958Q8N8K9 716 aa21.1■□□□□ 0.97
SFXN1-209ENST00000508290 CLSTN2Q9H4D0 955 aa21.1■□□□□ 0.97
SFXN1-209ENST00000508290 CSNK1G1Q9HCP0 422 aa21.1■□□□□ 0.97
SFXN1-209ENST00000508290 PNPLA8Q9NP80 782 aa21.1■□□□□ 0.97
SFXN1-209ENST00000508290 RWDD2AQ9UIY3 292 aa21.1■□□□□ 0.97
SFXN1-209ENST00000508290 MUC6Q6W4X9 2439 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 GOLGA6L22H0YM25 854 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 ARNTLO00327 626 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 TADA3O75528 432 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 PRAMEF12O95522 483 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 CKMP06732 381 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 CCDC192P0DO97 292 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 TCF3P15923 654 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 CAMK4Q16566 473 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 CBWD6Q4V339 395 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 CBWD3Q5JTY5 395 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 CBWD5Q5RIA9 395 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 TXNDC8Q6A555 127 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 TPRG1Q6ZUI0 275 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 SLC2A14Q8TDB8 520 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 SEMA4DQ92854 862 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 HNRNPABQ99729 332 aaKnown RBP21.09■□□□□ 0.97
SFXN1-209ENST00000508290 IER2Q9BTL4 223 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 HEBP1Q9NRV9 189 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 KRT82Q9NSB4 513 aa21.09■□□□□ 0.97
SFXN1-209ENST00000508290 NUP210Q8TEM1 1887 aaPredicted RBP21.09■□□□□ 0.97
SFXN1-209ENST00000508290 CLDN5O00501 218 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 AP1G2O75843 785 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 FAM200BP0CF97 657 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 YWHAQP27348 245 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 FMO5P49326 533 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 CC2D1AQ6P1N0 951 aaPredicted RBP21.08■□□□□ 0.97
SFXN1-209ENST00000508290 PAQR9Q6ZVX9 377 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 DTWD2Q8NBA8 298 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 STKLD1Q8NE28 680 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 PRSS33Q8NF86 280 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 USP13Q92995 863 aaPredicted RBP21.08■□□□□ 0.97
SFXN1-209ENST00000508290 RSPRY1Q96DX4 576 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 FBXO44Q9H4M3 255 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 LTB4R2Q9NPC1 389 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 CISHQ9NSE2 258 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 IL37Q9NZH6 218 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 HMGXB4Q9UGU5 601 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 DACH1Q9UI36 760 aa21.08■□□□□ 0.97
SFXN1-209ENST00000508290 ZNF840PA6NDX5 716 aa21.07■□□□□ 0.96
SFXN1-209ENST00000508290 PRKCSHP14314 528 aaPredicted RBP21.07■□□□□ 0.96
SFXN1-209ENST00000508290 CD58P19256 250 aa21.07■□□□□ 0.96
SFXN1-209ENST00000508290 AMPD2Q01433 879 aa21.07■□□□□ 0.96
SFXN1-209ENST00000508290 PDGFRLQ15198 375 aa21.07■□□□□ 0.96
SFXN1-209ENST00000508290 RALGPS2Q86X27 583 aaPredicted RBP21.07■□□□□ 0.96
SFXN1-209ENST00000508290 CYFIP2Q96F07 1278 aa21.07■□□□□ 0.96
SFXN1-209ENST00000508290 IPO9Q96P70 1041 aaKnown RBP21.07■□□□□ 0.96
SFXN1-209ENST00000508290 NUP62CLQ9H1M0 184 aa21.07■□□□□ 0.96
SFXN1-209ENST00000508290 TRPC7Q9HCX4 862 aa21.07■□□□□ 0.96
SFXN1-209ENST00000508290 GCNT4Q9P109 453 aa21.07■□□□□ 0.96
SFXN1-209ENST00000508290 ARHGAP26Q9UNA1 814 aa21.07■□□□□ 0.96
SFXN1-209ENST00000508290 PIAS3Q9Y6X2 628 aa21.07■□□□□ 0.96
SFXN1-209ENST00000508290 PTPRDP23468 1912 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 FAM92AA1XBS5 289 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 PI15O43692 258 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 CCDC130P13994 396 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 HDCP19113 662 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 RPS9P46781 194 aaKnown RBP21.06■□□□□ 0.96
SFXN1-209ENST00000508290 TUBP50607 506 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 CACNA2D1P54289 1103 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 USP46P62068 366 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 NHLH1Q02575 133 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 TCF15Q12870 199 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 TAF10Q12962 218 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 CUL2Q13617 745 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 UBXN2BQ14CS0 331 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 CT47A1Q5JQC4 288 aaPredicted RBP21.06■□□□□ 0.96
SFXN1-209ENST00000508290 TRIM59Q8IWR1 403 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 EXOC4Q96A65 974 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 ELMO3Q96BJ8 720 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 TMEM176AQ96HP8 235 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 TMEM30AQ9NV96 361 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 DLGAP2Q9P1A6 1054 aa21.06■□□□□ 0.96
SFXN1-209ENST00000508290 FAM170BA6NMN3 283 aa21.05■□□□□ 0.96
SFXN1-209ENST00000508290 TNFRSF10BO14763 440 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms