RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 POLD3Q15054 466 aaPredicted RBP6.18□□□□□ -1.42
DHFR-204ENST00000508282 PTCHD3Q3KNS1 767 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 AARS2Q5JTZ9 985 aaKnown RBP6.18□□□□□ -1.42
DHFR-204ENST00000508282 DARS2Q6PI48 645 aaKnown RBP6.18□□□□□ -1.42
DHFR-204ENST00000508282 LRRC71Q8N4P6 559 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 SOCS4Q8WXH5 440 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 TBC1D5Q92609 795 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 PPP2R3CQ969Q6 453 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 SPSB4Q96A44 273 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 REPS1Q96D71 796 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 APIPQ96GX9 242 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 METTL14Q9HCE5 456 aaKnown RBP6.18□□□□□ -1.42
DHFR-204ENST00000508282 XPNPEP3Q9NQH7 507 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 ADARB2Q9NS39 739 aaKnown RBP6.18□□□□□ -1.42
DHFR-204ENST00000508282 COL20A1Q9P218 1284 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 FRMD4BQ9Y2L6 1034 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 PAXBP1Q9Y5B6 917 aa6.18□□□□□ -1.42
DHFR-204ENST00000508282 MBD3L4A6NDZ8 208 aaPredicted RBP6.17□□□□□ -1.42
DHFR-204ENST00000508282 MBD3L3A6NE82 208 aaPredicted RBP6.17□□□□□ -1.42
DHFR-204ENST00000508282 MANSC4A6NHS7 340 aaPredicted RBP6.17□□□□□ -1.42
DHFR-204ENST00000508282 TARM1B6A8C7 271 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 QSOX1O00391 747 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 VNN1O95497 513 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 FAM193AP78312 1265 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 TFF2Q03403 129 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 CEP85Q6P2H3 762 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 PARS2Q7L3T8 475 aaKnown RBP6.17□□□□□ -1.42
DHFR-204ENST00000508282 SESTD1Q86VW0 696 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 IZUMO1Q8IYV9 350 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 RP9Q8TA86 221 aaKnown RBP6.17□□□□□ -1.42
DHFR-204ENST00000508282 TMEM171Q8WVE6 324 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 XAGE5Q8WWM1 108 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 DPF1Q92782 380 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 LRRC27Q9C0I9 530 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 GBA2Q9HCG7 927 aaPredicted RBP6.17□□□□□ -1.42
DHFR-204ENST00000508282 PRDM11Q9NQV5 511 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 ZSCAN32Q9NX65 697 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 GABRQQ9UN88 632 aa6.17□□□□□ -1.42
DHFR-204ENST00000508282 MAP4K4O95819 1239 aaPredicted RBP6.16□□□□□ -1.42
DHFR-204ENST00000508282 RHCEP18577 417 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 KLRC1P26715 233 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 PEX2P28328 305 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 RPS16P62249 146 aaKnown RBP6.16□□□□□ -1.42
DHFR-204ENST00000508282 RHDQ02161 417 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 Q6ZWC4 215 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 SLC29A4Q7RTT9 530 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 HASPINQ8TF76 798 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 TIFAQ96CG3 184 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 FSD1LQ9BXM9 530 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 TRMT13Q9NUP7 481 aaKnown RBP6.16□□□□□ -1.42
DHFR-204ENST00000508282 DNMT3BQ9UBC3 853 aaKnown RBP6.16□□□□□ -1.42
DHFR-204ENST00000508282 OGDHLQ9ULD0 1010 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 CDY1Q9Y6F8 540 aa6.16□□□□□ -1.42
DHFR-204ENST00000508282 MGEA5O60502 916 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 TJP3O95049 919 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 ZKSCAN1P17029 563 aaPredicted RBP6.15□□□□□ -1.42
DHFR-204ENST00000508282 CTGFP29279 349 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 CYP4F2P78329 520 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 SEMA5AQ13591 1074 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 PCID2Q5JVF3 399 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 SLC9A4Q6AI14 798 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 PPP4R4Q6NUP7 873 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 PTF1AQ7RTS3 328 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 ZNF804AQ7Z570 1209 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 KCTD20Q7Z5Y7 419 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 CAND1Q86VP6 1230 aaKnown RBP6.15□□□□□ -1.42
DHFR-204ENST00000508282 FANCBQ8NB91 859 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 DNAJB14Q8TBM8 379 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 PPP1R9BQ96SB3 815 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 MACROD1Q9BQ69 325 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 C17orf80Q9BSJ5 609 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 STK31Q9BXU1 1019 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 ZNF287Q9HBT7 754 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 SH3BP4Q9P0V3 963 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 ADAMTS5Q9UNA0 930 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 PCDHGB6Q9Y5F9 930 aa6.15□□□□□ -1.42
DHFR-204ENST00000508282 LOC102723971A0A1B0GUV8 181 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 CGB1A6NKQ9 187 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 H7C4K7 107 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 RASSF9O75901 435 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 JTBO76095 146 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 PARNO95453 639 aaKnown RBP6.14□□□□□ -1.43
DHFR-204ENST00000508282 PRKCGP05129 697 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 NPSP0C0P6 89 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 NHLRC4P0CG21 123 aaPredicted RBP6.14□□□□□ -1.43
DHFR-204ENST00000508282 IL1R1P14778 569 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 TPTEP56180 551 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 FOXF2Q12947 444 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 CCNIQ14094 377 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 NPY5RQ15761 445 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 CYP1B1Q16678 543 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 CERCAMQ5T4B2 595 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 SUMO4Q6EEV6 95 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 SRRM1Q8IYB3 904 aaKnown RBP6.14□□□□□ -1.43
DHFR-204ENST00000508282 SPARTQ8N0X7 666 aa6.14□□□□□ -1.43
DHFR-204ENST00000508282 LINC01548A6NM66 108 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 SRGAP2O75044 1071 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 BCAT1P54687 386 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 INSCQ1MX18 579 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 TMEM119Q4V9L6 283 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms