RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 BMP6P22004 513 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 DDX6P26196 483 aaKnown RBP eCLIP9.97□□□□□ -0.81
DDX41-209ENST00000508279 GTF2H1P32780 548 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 PPP1R2P41236 205 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 SOX9P48436 509 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 MAP3K7CLP57077 242 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 STARD6P59095 220 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 NHLH1Q02575 133 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 LRMPQ12912 555 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 PAK1Q13153 545 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 CBWD6Q4V339 395 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 CBWD3Q5JTY5 395 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 CBWD5Q5RIA9 395 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 PHLDB3Q6NSJ2 640 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 CC2D1AQ6P1N0 951 aaPredicted RBP9.97□□□□□ -0.81
DDX41-209ENST00000508279 ZNF852Q6ZMS4 543 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 CELF5Q8N6W0 485 aaKnown RBP9.97□□□□□ -0.81
DDX41-209ENST00000508279 DTWD2Q8NBA8 298 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 PJA1Q8NG27 643 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 SLC2A14Q8TDB8 520 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 DNASE1L2Q92874 299 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 USP13Q92995 863 aaPredicted RBP9.97□□□□□ -0.81
DDX41-209ENST00000508279 TATDN2Q93075 761 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 TRMT2BQ96GJ1 504 aaKnown RBP9.97□□□□□ -0.81
DDX41-209ENST00000508279 SMARCD1Q96GM5 515 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 SPATA17Q96L03 361 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 LRRC3BQ96PB8 259 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 TWNKQ96RR1 684 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 BCO2Q9BYV7 579 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 LTB4R2Q9NPC1 389 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 TDP1Q9NUW8 608 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 TMEM30AQ9NV96 361 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 THG1LQ9NWX6 298 aaKnown RBP9.97□□□□□ -0.81
DDX41-209ENST00000508279 RAB20Q9NX57 234 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 TRPM5Q9NZQ8 1165 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 PIAS3Q9Y6X2 628 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 CACNA1IQ9P0X4 2223 aa9.97□□□□□ -0.81
DDX41-209ENST00000508279 COL4A2P08572 1712 aa9.96□□□□□ -0.81
DDX41-209ENST00000508279 CHADO15335 359 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 USP17L7P0C7H9 530 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 HDCP19113 662 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 TARSP26639 723 aaKnown RBP9.96□□□□□ -0.82
DDX41-209ENST00000508279 YWHAQP27348 245 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 ENPEPQ07075 957 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 TNK2Q07912 1038 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 TAF10Q12962 218 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 TRIM68Q6AZZ1 485 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 TTI2Q6NXR4 508 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 FILIP1Q7Z7B0 1213 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 MON1AQ86VX9 555 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 UNC93AQ86WB7 457 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 ZC3H3Q8IXZ2 948 aaKnown RBP9.96□□□□□ -0.82
DDX41-209ENST00000508279 CCDC105Q8IYK2 499 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 FUKQ8N0W3 1084 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 NUP93Q8N1F7 819 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 SCAMP5Q8TAC9 235 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 FAM3CQ92520 227 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 FBXO32Q969P5 355 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 CYFIP2Q96F07 1278 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 C8orf48Q96LL4 319 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 MYRFLQ96LU7 910 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 HEXIM2Q96MH2 286 aaKnown RBP9.96□□□□□ -0.82
DDX41-209ENST00000508279 CEP63Q96MT8 703 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 SLITRK1Q96PX8 696 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 SLC22A12Q96S37 553 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 PHOX2BQ99453 314 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 ARID3AQ99856 593 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 DUSP9Q99956 384 aaKnown RBP9.96□□□□□ -0.82
DDX41-209ENST00000508279 NT5C1AQ9BXI3 368 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 SRRTQ9BXP5 876 aaKnown RBP9.96□□□□□ -0.82
DDX41-209ENST00000508279 DNAI2Q9GZS0 605 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 CYP3A43Q9HB55 503 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 METTL14Q9HCE5 456 aaKnown RBP9.96□□□□□ -0.82
DDX41-209ENST00000508279 DMAP1Q9NPF5 467 aaPredicted RBP9.96□□□□□ -0.82
DDX41-209ENST00000508279 GKN1Q9NS71 199 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 GTSE1Q9NYZ3 720 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 EHD2Q9NZN4 543 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 KIAA1468Q9P260 1216 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 MRPS17Q9Y2R5 130 aaKnown RBP9.96□□□□□ -0.82
DDX41-209ENST00000508279 ARIH1Q9Y4X5 557 aaPredicted RBP9.96□□□□□ -0.82
DDX41-209ENST00000508279 F5P12259 2224 aa9.96□□□□□ -0.82
DDX41-209ENST00000508279 MYOFQ9NZM1 2061 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 MAN2B1O00754 1011 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 NCAM2O15394 837 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 CILPO75339 1184 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 BEST1O76090 585 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 FAM200BP0CF97 657 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 GLULP15104 373 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 SLC5A3P53794 718 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 FCHO2Q0JRZ9 810 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 ANGPT1Q15389 498 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 PAQR9Q6ZVX9 377 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 FRMD5Q7Z6J6 570 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 ALYREFQ86V81 257 aaKnown RBP9.95□□□□□ -0.82
DDX41-209ENST00000508279 SLC35C1Q96A29 364 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 SMOQ99835 787 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 EBF3Q9H4W6 596 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 CISHQ9NSE2 258 aa9.95□□□□□ -0.82
DDX41-209ENST00000508279 SPATA6Q9NWH7 488 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms