RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 EFHC1Q5JVL4 640 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 MAP3K21Q5TCX8 1036 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 CDHR3Q6ZTQ4 885 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 SHKBP1Q8TBC3 707 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 PYDC1Q8WXC3 89 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 SRPK1Q96SB4 655 aaKnown RBP17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 RIT2Q99578 217 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 GINM1Q9NU53 330 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 PARVAQ9NVD7 372 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 ADAMTS6Q9UKP5 1117 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 PRR12Q9ULL5 1215 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 SOX13Q9UN79 622 aa17.86■□□□□ 0.45
SQSTM1-211ENST00000506690 BTBD19C9JJ37 291 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 FAM155BO75949 473 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 P4HBP07237 508 aaKnown RBP17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 CCDC166P0CW27 439 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 CHN2P52757 468 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 GDF10P55107 478 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 HIC1Q14526 733 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 PDK3Q15120 406 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 LRRC36Q1X8D7 754 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 TMEM259Q4ZIN3 620 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 CES4AQ5XG92 561 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 LPCAT4Q643R3 524 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 ABRAQ8N0Z2 381 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 MIPOL1Q8TD10 442 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 TBX20Q9UMR3 447 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 EXOC7Q9UPT5 735 aa17.85■□□□□ 0.45
SQSTM1-211ENST00000506690 TCRBV7S3A2A0A539 114 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 CSDE1O75534 798 aaKnown RBP17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 TMEM63AO94886 807 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 SERPINA6P08185 405 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 POLR2MP0CAP2 368 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 ZNF252P-AS1Q0IIN9 211 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 BBS9Q3SYG4 887 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 TBC1D10BQ4KMP7 808 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 TEX44Q53QW1 395 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 APOBEC3HQ6NTF7 200 aaKnown RBP17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 USP37Q86T82 979 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 MAP4K3Q8IVH8 894 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 TRIM42Q8IWZ5 723 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 PDIK1LQ8N165 341 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 PRICKLE1Q96MT3 831 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 SSX2IPQ9Y2D8 614 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 TCRBV9S1A1TA0A576 114 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 TMEM191CA6NGB0 347 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 VILLO15195 856 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 CCNT2O60583 730 aaKnown RBP17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 TMEM191BP0C7N4 346 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 SMIM18P0DKX4 95 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 AOC1P19801 751 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 HMGB2P26583 209 aaKnown RBP17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 AQP5P55064 265 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 ZNF200P98182 395 aaPredicted RBP17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 KBTBD12Q3ZCT8 623 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 ANKRD20A4Q4UJ75 823 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 ATG16L1Q676U5 607 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 TXNRD3NBQ6F5E7 133 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 C15orf39Q6ZRI6 1047 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 ACAP3Q96P50 834 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 MECRQ9BV79 373 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 GPRC5CQ9NQ84 441 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 SIRPGQ9P1W8 387 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 IKBKGQ9Y6K9 419 aa17.84■□□□□ 0.45
SQSTM1-211ENST00000506690 DDX39AO00148 427 aaKnown RBP17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 COPEO14579 308 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 INHBAP08476 426 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 ACO1P21399 889 aaKnown RBP17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 PEX2P28328 305 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 RPL22P35268 128 aaKnown RBP17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 ALDH18A1P54886 795 aaKnown RBP17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 PSMC5P62195 406 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 MTM1Q13496 603 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 MMEL1Q495T6 779 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 TMEM179Q6ZVK1 233 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 MIER3Q7Z3K6 550 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 IGDCC3Q8IVU1 814 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 GDPD5Q8WTR4 605 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 E2F7Q96AV8 911 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 UBR3Q6ZT12 1888 aa17.83■□□□□ 0.45
SQSTM1-211ENST00000506690 SCNN1DP51172 638 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 HPCAP84074 193 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 TMPRSS15P98073 1019 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 DEUP1Q05D60 604 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 CCNIQ14094 377 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 TATDN1Q6P1N9 297 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 TMEM161BQ8NDZ6 487 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 IRGQQ8WZA9 623 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 BTBD9Q96Q07 612 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 IQCGQ9H095 443 aaKnown RBP17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 SORCS3Q9UPU3 1222 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 CHMP2BQ9UQN3 213 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 ZNF510Q9Y2H8 683 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 ZBTB12Q9Y330 459 aaPredicted RBP17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 PLLPQ9Y342 182 aa17.83■□□□□ 0.44
SQSTM1-211ENST00000506690 MEI4A8MW99 385 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 F8VP50 259 aa17.82■□□□□ 0.44
SQSTM1-211ENST00000506690 ENPEPQ07075 957 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms