RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 CCDC6Q16204 474 aa22.44■■□□□ 1.18
SQSTM1-210ENST00000506042 CYP2U1Q7Z449 544 aa22.44■■□□□ 1.18
SQSTM1-210ENST00000506042 MYCBPAPQ8TBZ2 947 aa22.44■■□□□ 1.18
SQSTM1-210ENST00000506042 CLIC6Q96NY7 704 aa22.44■■□□□ 1.18
SQSTM1-210ENST00000506042 LSM14BQ9BX40 385 aaKnown RBP22.44■■□□□ 1.18
SQSTM1-210ENST00000506042 DUSP15Q9H1R2 295 aaPredicted RBP22.44■■□□□ 1.18
SQSTM1-210ENST00000506042 GCNT4Q9P109 453 aa22.44■■□□□ 1.18
SQSTM1-210ENST00000506042 CGNQ9P2M7 1197 aaKnown RBP22.44■■□□□ 1.18
SQSTM1-210ENST00000506042 BCLAF3A2AJT9 711 aaKnown RBP22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 C2orf78A6NCI8 922 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 RTN3O95197 1032 aaPredicted RBP22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 APODP05090 189 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 CASP5P51878 434 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 PSMC1P62191 440 aaKnown RBP22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 EOGTQ5NDL2 527 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 BTBD8Q5XKL5 378 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 TRMT11Q7Z4G4 463 aaKnown RBP22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 PDILTQ8N807 584 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 OR6B3Q8NGW1 331 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 CNOT6LQ96LI5 555 aaKnown RBP22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 C8orf48Q96LL4 319 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 ZNF396Q96N95 335 aaPredicted RBP22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 PNKPQ96T60 521 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 IKZF4Q9H2S9 585 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 MAGEF1Q9HAY2 307 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 HSPBP1Q9NZL4 362 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 SIX4Q9UIU6 781 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 MMP17Q9ULZ9 603 aa22.43■■□□□ 1.18
SQSTM1-210ENST00000506042 LEFTY2O00292 366 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 MAP3K13O43283 966 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 PDGFRBP09619 1106 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 ASIC1P78348 528 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 SLC7A9P82251 487 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 SNRNP35Q16560 246 aaKnown RBP22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 C2orf27AQ580R0 203 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 N4BP2L1Q5TBK1 243 aaPredicted RBP22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 OSTM1Q86WC4 334 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 IQUBQ8NA54 791 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 SYAP1Q96A49 352 aaPredicted RBP22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 OTUB2Q96DC9 234 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 TTLL2Q9BWV7 592 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 PANK2Q9BZ23 570 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 DNAI2Q9GZS0 605 aa22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 FBRSL1Q9HCM7 1045 aaKnown RBP22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 BCCIPQ9P287 314 aaKnown RBP eCLIP22.42■■□□□ 1.18
SQSTM1-210ENST00000506042 DNAH14Q0VDD8 3507 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 PHACTR2O75167 634 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 TACC1O75410 805 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 KCNK5O95279 499 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 DLATP10515 647 aaKnown RBP22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 PDIA4P13667 645 aaKnown RBP22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 SYT1P21579 422 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 PMLP29590 882 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 ATICP31939 592 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 LMAN2Q12907 356 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 RESTQ13127 1097 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 ANO7Q6IWH7 933 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 TRAPPC11Q7Z392 1133 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 TTC30AQ86WT1 665 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 USP33Q8TEY7 942 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 WHAMMQ8TF30 809 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 OVCA2Q8WZ82 227 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 PCED1BQ96HM7 432 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 INTS4Q96HW7 963 aaKnown RBP22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 SLC22A12Q96S37 553 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 TMEM9BQ9NQ34 198 aa22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 CIZ1Q9ULV3 898 aaPredicted RBP22.41■■□□□ 1.18
SQSTM1-210ENST00000506042 P4HA1P13674 534 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 NOVA1P51513 510 aaKnown RBP22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 AP3M2P53677 418 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 SEC13P55735 322 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 WNT7BP56706 349 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 WDR72Q3MJ13 1102 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 MDH1BQ5I0G3 518 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 PMS2CLQ68D20 193 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 LPCAT2Q7L5N7 544 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 CBWD2Q8IUF1 395 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 XXYLT1Q8NBI6 393 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 CXorf38Q8TB03 319 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 KBTBD7Q8WVZ9 684 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 TNIP3Q96KP6 325 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 NUSAP1Q9BXS6 441 aaKnown RBP22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 NACA2Q9H009 215 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 CPQQ9Y646 472 aa22.4■■□□□ 1.18
SQSTM1-210ENST00000506042 CACNA1BQ00975 2339 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 A8MXQ7 604 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 F8VP50 259 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 TM4SF5O14894 197 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 ATP2C2O75185 946 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 KRT37O76014 449 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 MBL2P11226 248 aaPredicted RBP22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 DHPSP49366 369 aaPredicted RBP22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 GOLGA8FQ08AF8 430 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 GOLGA8DPQ0D2H9 430 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 CRY1Q16526 586 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 FAM26FQ5R3K3 315 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 LIMS2Q7Z4I7 341 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 FILIP1Q7Z7B0 1213 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 NUP93Q8N1F7 819 aa22.39■■□□□ 1.17
SQSTM1-210ENST00000506042 OR5B17Q8NGF7 314 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms