RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 CHCHD4Q8N4Q1 142 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 C1orf127Q8N9H9 656 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 EZH1Q92800 747 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 ANKRD36BP1Q96IX9 119 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 FAM84AQ96KN4 292 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 CNOT6LQ96LI5 555 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 ZNF396Q96N95 335 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 PI4K2AQ9BTU6 479 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 MTMR12Q9C0I1 747 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 LRRC27Q9C0I9 530 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 ECT2Q9H8V3 914 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 PDE11AQ9HCR9 933 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 DDX43Q9NXZ2 648 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 TFIP11Q9UBB9 837 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 ITGA11Q9UKX5 1188 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 ITPR1Q14643 2758 aa17.17■□□□□ 0.34
PDLIM7-213ENST00000505074 CEP192Q8TEP8 1941 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 UPK3BL1B0FP48 263 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 UPK3BL2E5RIL1 263 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 SPTLC2O15270 562 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 CAPNS1P04632 268 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 ACAT1P24752 427 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 NASPP49321 788 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 ASIC1P78348 528 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 SEMA3BQ13214 749 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 FOXD4L6Q3SYB3 417 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 LMBRD2Q68DH5 695 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 FOXD4L3Q6VB84 417 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 LPCAT2Q7L5N7 544 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 GPD1LQ8N335 351 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 PDCL2Q8N4E4 241 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 HDDC3Q8N4P3 179 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 STKLD1Q8NE28 680 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 TTC16Q8NEE8 873 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 DHX58Q96C10 678 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 BACH2Q9BYV9 841 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 TNMDQ9H2S6 317 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 TMLHEQ9NVH6 421 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 L1RE1Q9UN81 338 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 SNX9Q9Y5X1 595 aa17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 SETXQ7Z333 2677 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-213ENST00000505074 FRMD3A2A2Y4 597 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 EIF4E1BA6NMX2 242 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 TNFRSF10BO14763 440 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 MAP3K13O43283 966 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 TNNC2P02585 160 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 DPP6P42658 865 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 GPR15P49685 360 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 ATXN3P54252 364 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 NLRP12P59046 1061 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 RBP5P82980 135 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 NFE2Q16621 373 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 ZNF423Q2M1K9 1284 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 COL28A1Q2UY09 1125 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 SDHAF4Q5VUM1 108 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 SYT12Q8IV01 421 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 ADGRF2Q8IZF7 708 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 LRRC52Q8N7C0 313 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 LINC00301Q8NCQ3 95 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 MRPS31Q92665 395 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 HPS3Q969F9 1004 aa17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 DUS2Q9NX74 493 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 MORC2Q9Y6X9 1032 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-213ENST00000505074 PLXND1Q9Y4D7 1925 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 ALDH1A2O94788 518 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 F11P03951 625 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 IFNAR2P48551 515 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 AMPD3Q01432 767 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 SCAPQ12770 1279 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 MYO1EQ12965 1108 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 NR1H3Q13133 447 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 ZNF268Q14587 947 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 MTF1Q14872 753 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 TXNDC8Q6A555 127 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 SLC23A3Q6PIS1 610 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 TMEM150AQ86TG1 271 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 TTC30AQ86WT1 665 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 SPATA2LQ8IUW3 424 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 TMEM86AQ8N2M4 240 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 GLIS3Q8NEA6 775 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 MDGA1Q8NFP4 955 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 RIN3Q8TB24 985 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 ATP2A3Q93084 1043 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 ACBD6Q9BR61 282 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 CIZ1Q9ULV3 898 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 CACNA1EQ15878 2313 aa17.14■□□□□ 0.33
PDLIM7-213ENST00000505074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 ZNF233A6NK53 670 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 KIAA0391O15091 583 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 ZIC2O95409 532 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 CSH1P0DML2 217 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 CSH2P0DML3 217 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 CYP2F1P24903 491 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 RPL10AP62906 217 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 HNRNPDQ14103 355 aaKnown RBP17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 DDR2Q16832 855 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 C2orf27AQ580R0 203 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 INTS6LQ5JSJ4 861 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms