RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 TPM3P06753 285 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 SETSIPP0DME0 302 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 TCF3P15923 654 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 NPR3P17342 541 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 ATF6P18850 670 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 CD58P19256 250 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 BCAT1P54687 386 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 PTK2Q05397 1052 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 HTR4Q13639 388 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 E2F5Q15329 346 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 DDR2Q16832 855 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 GPR158Q5T848 1215 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 SNX30Q5VWJ9 437 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 FAM35AQ86V20 835 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 TMC8Q8IU68 726 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 CMTM8Q8IZV2 173 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 ZSCAN18Q8TBC5 510 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-220ENST00000505005 CSGALNACT1Q8TDX6 532 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 GIPC2Q8TF65 315 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 GOLGA1Q92805 767 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 IQCDQ96DY2 449 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 MCRS1Q96EZ8 462 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 NOX5Q96PH1 765 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 MYADMQ96S97 322 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 IER2Q9BTL4 223 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 LRRC3Q9BY71 257 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 OSBPL6Q9BZF3 934 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 DNAJC25Q9H1X3 360 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 MFSD1Q9H3U5 465 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 C8orf33Q9H7E9 229 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-220ENST00000505005 CYLDQ9NQC7 956 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 MAGED2Q9UNF1 606 aaPredicted RBP10.43□□□□□ -0.74
NR1I3-220ENST00000505005 CEP83Q9Y592 693 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 PCDHB4Q9Y5E5 795 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 MYH10P35580 1976 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 GOLGA6L19H0YKK7 550 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 ZNF263O14978 683 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 ATP2C2O75185 946 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 VNN2O95498 520 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 RALAP11233 206 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 HMGA1P17096 107 aaKnown RBP10.42□□□□□ -0.74
NR1I3-220ENST00000505005 HDCP19113 662 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 ACADSBP45954 432 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 CLCN5P51795 746 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 TYRO3Q06418 890 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 BST2Q10589 180 aaKnown RBP10.42□□□□□ -0.74
NR1I3-220ENST00000505005 MTA1Q13330 715 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 CNGA2Q16280 664 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 SPOPLQ6IQ16 392 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 PHLDB3Q6NSJ2 640 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 CAVIN1Q6NZI2 390 aaKnown RBP10.42□□□□□ -0.74
NR1I3-220ENST00000505005 TRIM65Q6PJ69 517 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 TMEM270Q6UE05 265 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 NUDT18Q6ZVK8 323 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 FUKQ8N0W3 1084 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 MSANTD4Q8NCY6 345 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 ITFG1Q8TB96 612 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 SHKBP1Q8TBC3 707 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 SLC2A14Q8TDB8 520 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 BPIFB1Q8TDL5 484 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 SEMA4DQ92854 862 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 FBXO32Q969P5 355 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 OTUB2Q96DC9 234 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 HSFY1Q96LI6 401 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 B3GNT5Q9BYG0 378 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 INTS2Q9H0H0 1204 aaKnown RBP10.42□□□□□ -0.74
NR1I3-220ENST00000505005 BRD9Q9H8M2 597 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 APOBEC3GQ9HC16 384 aaKnown RBP10.42□□□□□ -0.74
NR1I3-220ENST00000505005 UBE2TQ9NPD8 197 aaPredicted RBP10.42□□□□□ -0.74
NR1I3-220ENST00000505005 PLCB1Q9NQ66 1216 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 OLA1Q9NTK5 396 aaKnown RBP10.42□□□□□ -0.74
NR1I3-220ENST00000505005 TDP1Q9NUW8 608 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 TMLHEQ9NVH6 421 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 HCFC1R1Q9NWW0 138 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 IL37Q9NZH6 218 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 TBC1D14Q9P2M4 693 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 MUTYHQ9UIF7 546 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 CNTN6Q9UQ52 1028 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 NUMBLQ9Y6R0 609 aa10.42□□□□□ -0.74
NR1I3-220ENST00000505005 FAM92AA1XBS5 289 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 RIOK3O14730 519 aaKnown RBP10.41□□□□□ -0.74
NR1I3-220ENST00000505005 FBXO21O94952 628 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 CKMP06732 381 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 CD19P15391 556 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 ZNF165P49910 485 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 KPNA1P52294 538 aaPredicted RBP10.41□□□□□ -0.74
NR1I3-220ENST00000505005 RAD23BP54727 409 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 NTHL1P78549 312 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 FCHO2Q0JRZ9 810 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 PDGFRLQ15198 375 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 TEAD2Q15562 447 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 HECTD3Q5T447 861 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 PPP1R2P3Q6NXS1 205 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 KLHDC10Q6PID8 442 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 LCLAT1Q6UWP7 414 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 GAREM2Q75VX8 874 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 ARID3BQ8IVW6 561 aaPredicted RBP10.41□□□□□ -0.74
NR1I3-220ENST00000505005 SCML4Q8N228 414 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 LMO3Q8TAP4 145 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 STK32AQ8WU08 396 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms