RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 MAP2K7O14733 419 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 WDR46O15213 610 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 TCEA3O75764 348 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 SLITRK3O94933 977 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 ZBTB7AO95365 584 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 AFPP02771 609 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 NR3C1P04150 777 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 ATP1A1P05023 1023 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 ITGB2P05107 769 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 SERPING1P05155 500 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 ICAM1P05362 532 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 RSPH10BP0C881 870 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 ZBTB48P10074 688 aaPredicted RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 ALAS1P13196 640 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 MUTP22033 750 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 BMP8BP34820 402 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 HNRNPH2P55795 449 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 JAM2P57087 298 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 TNK2Q07912 1038 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 RAPGEF1Q13905 1077 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 DCAF17Q5H9S7 520 aaPredicted RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 RTP2Q5QGT7 225 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 EEF1DP3Q658K8 133 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 TRAPPC11Q7Z392 1133 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 OSTM1Q86WC4 334 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 CPXCR1Q8N123 301 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 JADE3Q92613 823 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 LPAR1Q92633 364 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 SYN2Q92777 582 aaPredicted RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 TCTN2Q96GX1 697 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 CAPZA3Q96KX2 299 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 CCDC43Q96MW1 224 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 HSD17B14Q9BPX1 270 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 MXRA8Q9BRK3 442 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 BOCQ9BWV1 1114 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 GLIS2Q9BZE0 524 aaPredicted RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 PARVGQ9HBI0 331 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 POLD4Q9HCU8 107 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 HDAC6Q9UBN7 1215 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 SCAF8Q9UPN6 1271 aaKnown RBP6.11□□□□□ -1.43
SNX25-203ENST00000504959 TRAF3IP3Q9Y228 551 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 PTPN22Q9Y2R2 807 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 SPO11Q9Y5K1 396 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 DUSP10Q9Y6W6 482 aa6.11□□□□□ -1.43
SNX25-203ENST00000504959 COL11A1P12107 1806 aaPredicted RBP6.1□□□□□ -1.43
SNX25-203ENST00000504959 SSU72P8A0A1W2PR75 194 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 ZNF561-AS1K7EIQ3 104 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 TULP2O00295 520 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 GSTA4O15217 222 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 CLIC2O15247 247 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 EIF3DO15371 548 aaKnown RBP eCLIP6.1□□□□□ -1.43
SNX25-203ENST00000504959 SLC16A3O15427 465 aaKnown RBP6.1□□□□□ -1.43
SNX25-203ENST00000504959 GAS2O43903 313 aaKnown RBP6.1□□□□□ -1.43
SNX25-203ENST00000504959 FLOT1O75955 427 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 LCA5LO95447 670 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 TUBBP07437 444 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 GSTM1P09488 218 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 ARP10275 920 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 MCM3P25205 808 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 NOP2P46087 812 aaKnown RBP6.1□□□□□ -1.43
SNX25-203ENST00000504959 GFPT1Q06210 699 aaPredicted RBP6.1□□□□□ -1.43
SNX25-203ENST00000504959 KLHL30Q0D2K2 578 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 GPS2Q13227 327 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 EPHA7Q15375 998 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 ASIC2Q16515 512 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 ARHGAP44Q17R89 818 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 SFRP5Q5T4F7 317 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 PAPD7Q5XG87 772 aaKnown RBP6.1□□□□□ -1.43
SNX25-203ENST00000504959 CCDC70Q6NSX1 233 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 XRRA1Q6P2D8 792 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 SLC30A10Q6XR72 485 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 MIER3Q7Z3K6 550 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 CPNE8Q86YQ8 564 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 ZC3H3Q8IXZ2 948 aaKnown RBP6.1□□□□□ -1.43
SNX25-203ENST00000504959 TMEM130Q8N3G9 435 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 MSANTD4Q8NCY6 345 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 PPM1EQ8WY54 764 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 EZH1Q92800 747 aaPredicted RBP6.1□□□□□ -1.43
SNX25-203ENST00000504959 SCYL1Q96KG9 808 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 RPGRIP1Q96KN7 1286 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 SPAG5Q96R06 1193 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 UNC45AQ9H3U1 944 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 ANKZF1Q9H8Y5 726 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 PRDM5Q9NQX1 630 aaPredicted RBP6.1□□□□□ -1.43
SNX25-203ENST00000504959 OLFML3Q9NRN5 406 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 KCND2Q9NZV8 630 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 SEL1LQ9UBV2 794 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 RAB21Q9UL25 225 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 JRKLQ9Y4A0 524 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 BRCA1P38398 1863 aaKnown RBP6.1□□□□□ -1.43
SNX25-203ENST00000504959 DOCK1Q14185 1865 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 WDR81Q562E7 1941 aa6.1□□□□□ -1.43
SNX25-203ENST00000504959 KIAA1217Q5T5P2 1943 aa6.09□□□□□ -1.43
SNX25-203ENST00000504959 MSTNO14793 375 aa6.09□□□□□ -1.43
SNX25-203ENST00000504959 ZNF263O14978 683 aa6.09□□□□□ -1.43
SNX25-203ENST00000504959 SART1O43290 800 aaKnown RBP6.09□□□□□ -1.43
SNX25-203ENST00000504959 CTNND1O60716 968 aaKnown RBP6.09□□□□□ -1.43
SNX25-203ENST00000504959 SRGAP2O75044 1071 aa6.09□□□□□ -1.43
SNX25-203ENST00000504959 ZBED4O75132 1171 aa6.09□□□□□ -1.43
SNX25-203ENST00000504959 NOL4O94818 638 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms