RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ETFBP38117 255 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 EXD1Q8NHP7 514 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 HNRNPLLQ8WVV9 542 aaKnown RBP14.7□□□□□ -0.06
TCOF1-207ENST00000504761 ATP6V1E2Q96A05 226 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 SLITRK1Q96PX8 696 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 TSPYL2Q9H2G4 693 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-207ENST00000504761 VIPAS39Q9H9C1 493 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 ST3GAL5Q9UNP4 418 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 AP4E1Q9UPM8 1137 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 FRMD3A2A2Y4 597 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 MAPK13O15264 365 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 TYK2P29597 1187 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 PRAMEP78395 509 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 BFSP2Q13515 415 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 C15orf59Q2T9L4 293 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-207ENST00000504761 ARL8AQ96BM9 186 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 VPS39Q96JC1 886 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 GPR25O00155 361 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 ASS1P00966 412 aaKnown RBP14.7□□□□□ -0.06
TCOF1-207ENST00000504761 MX2P20592 715 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 RASSF2P50749 326 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 YWHAHQ04917 246 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-207ENST00000504761 CCL14Q16627 93 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 C18orf25Q96B23 403 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-207ENST00000504761 PCDHB18PQ96TA0 734 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 CYTH2Q99418 400 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 RRP15Q9Y3B9 282 aaKnown RBP14.7□□□□□ -0.06
TCOF1-207ENST00000504761 GMNCA6NCL1 334 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 SH3BP5O60239 455 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 CDH16O75309 829 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 FAM153BP0C7A2 387 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 ARL2P36404 184 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 STAT4Q14765 748 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 FAM153CQ494X1 144 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 COLEC11Q9BWP8 271 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 NIFKQ9BYG3 293 aaKnown RBP14.7□□□□□ -0.06
TCOF1-207ENST00000504761 TRABDQ9H4I3 376 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 SARS2Q9NP81 518 aaKnown RBP14.7□□□□□ -0.06
TCOF1-207ENST00000504761 PAK5Q9P286 719 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 FAM153AQ9UHL3 310 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 PLCH1Q4KWH8 1693 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 CNTNAP2Q9UHC6 1331 aa14.7□□□□□ -0.06
TCOF1-207ENST00000504761 ZBTB48P10074 688 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-207ENST00000504761 LHX1P48742 406 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 MAPRE1Q15691 268 aaKnown RBP14.69□□□□□ -0.06
TCOF1-207ENST00000504761 SH3D19Q5HYK7 790 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 IL31Q6EBC2 164 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 TRMT10CQ7L0Y3 403 aaKnown RBP14.69□□□□□ -0.06
TCOF1-207ENST00000504761 C12orf56Q8IXR9 622 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 MDM1Q8TC05 714 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 SEPT8Q92599 483 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 SENP6Q9GZR1 1112 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-207ENST00000504761 CHST7Q9NS84 486 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 GGT7Q9UJ14 662 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 C3orf70A6NLC5 250 aaPredicted RBP14.69□□□□□ -0.06
TCOF1-207ENST00000504761 DMTNQ08495 405 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 PDK1Q15118 436 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 SLFN11Q7Z7L1 901 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 IPMKQ8NFU5 416 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.69□□□□□ -0.06
TCOF1-207ENST00000504761 APOL2Q9BQE5 337 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 SALL4Q9UJQ4 1053 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 BDNFP23560 247 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 MIPP30301 263 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 SEC24CP53992 1094 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 FAM171A1Q5VUB5 890 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 KLHL29Q96CT2 875 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 ZFP42Q96MM3 310 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 ZNF112Q9UJU3 913 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 PCDHA3Q9Y5H8 950 aa14.69□□□□□ -0.06
TCOF1-207ENST00000504761 TBKBP1A7MCY6 615 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 ALDH2P05091 517 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 EFEMP1Q12805 493 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 RNF219Q5W0B1 726 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-207ENST00000504761 FOXR2Q6PJQ5 311 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 FBXO32Q969P5 355 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 RECQLP46063 649 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-207ENST00000504761 CCL23P55773 120 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 MAMLD1Q13495 774 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 TAF1BQ53T94 588 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-207ENST00000504761 DEFB106AQ8N104 65 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 SLC25A41Q8N5S1 370 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 AGR3Q8TD06 166 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 TGS1Q96RS0 853 aaKnown RBP14.68□□□□□ -0.06
TCOF1-207ENST00000504761 SEMA4AQ9H3S1 761 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 PMPCBO75439 489 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 PAEPP09466 180 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 AXLP30530 894 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 CCNYL1Q8N7R7 359 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 PPFIBP2Q8ND30 876 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 RPRD1AQ96P16 312 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-207ENST00000504761 PCDHA2Q9Y5H9 948 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 ZC3H4Q9UPT8 1303 aaKnown RBP14.68□□□□□ -0.06
TCOF1-207ENST00000504761 PPP1R37O75864 691 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 PAMP19021 973 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 NCF2P19878 526 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-207ENST00000504761 MRPS6P82932 125 aaKnown RBP14.68□□□□□ -0.06
TCOF1-207ENST00000504761 SLC12A1Q13621 1099 aa14.68□□□□□ -0.06
TCOF1-207ENST00000504761 ZNF268Q14587 947 aaPredicted RBP14.68□□□□□ -0.06
TCOF1-207ENST00000504761 EPS8L3Q8TE67 593 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms