RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MTHFD2P13995 350 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 PTPN1P18031 435 aaKnown RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 RNF4P78317 190 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 RPA4Q13156 261 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 HABP2Q14520 560 aaPredicted RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 LEXMQ3ZCV2 418 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 SUPT20HL1Q3ZLR7 823 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 GLE1Q53GS7 698 aaKnown RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 DCAF17Q5H9S7 520 aaPredicted RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 MFSD5Q6N075 450 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 ESPNLQ6ZVH7 1005 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 CCDC117Q8IWD4 279 aaPredicted RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 FRMD1Q8N878 549 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 FIBINQ8TAL6 211 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 ETNPPLQ8TBG4 499 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 PGAP3Q96FM1 320 aaPredicted RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 PTCHD1Q96NR3 888 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 SAMD11Q96NU1 681 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 NOL10Q9BSC4 688 aaKnown RBP5.59□□□□□ -1.51
NIPBL-204ENST00000504430 TRIM7Q9C029 511 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 GLT8D2Q9H1C3 349 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 C1orf21Q9H246 121 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 VCPKMTQ9H867 229 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 RXFP3Q9NSD7 469 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 ARHGAP20Q9P2F6 1191 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 RWDD3Q9Y3V2 267 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 ACTL7BQ9Y614 415 aa5.59□□□□□ -1.51
NIPBL-204ENST00000504430 KIAA1217Q5T5P2 1943 aa5.59□□□□□ -1.52
NIPBL-204ENST00000504430 BRD4O60885 1362 aaPredicted RBP5.59□□□□□ -1.52
NIPBL-204ENST00000504430 NSD2O96028 1365 aa5.59□□□□□ -1.52
NIPBL-204ENST00000504430 A0A1W2PRV1 198 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 GDF9O60383 454 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 PRDM1O75626 825 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 CYP21A2P08686 494 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ADH5P11766 374 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 CPT2P23786 658 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ASPAP45381 313 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 OR1G1P47890 313 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 DHPSP49366 369 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 DEUP1Q05D60 604 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 KIF5AQ12840 1032 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 MAMLD1Q13495 774 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 SPIDRQ14159 915 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 SLC39A12Q504Y0 691 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ODF2Q5BJF6 829 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ZRANB3Q5FWF4 1079 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 E4F1Q66K89 784 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 WDR93Q6P2C0 686 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ATF7IPQ6VMQ6 1270 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 CILP2Q8IUL8 1156 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ZGPATQ8N5A5 531 aaKnown RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 OR56A3Q8NH54 315 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 RFWD2Q8NHY2 731 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 THAP4Q8WY91 577 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 TBC1D5Q92609 795 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 FOXRED1Q96CU9 486 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 COLEC11Q9BWP8 271 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 MTG2Q9H4K7 406 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ACSS2Q9NR19 701 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ATXN7L1Q9ULK2 861 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 DNAJC16Q9Y2G8 782 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ADAMTS4O75173 837 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 IPO7O95373 1038 aaKnown RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 PRAMEF12O95522 483 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 GGPS1O95749 300 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ITGA2BP08514 1039 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 LAMP2P13473 410 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 VAV1P15498 845 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 THBS2P35442 1172 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 MCAMP43121 646 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 CAMLGP49069 296 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 BCAT1P54687 386 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 STARD6P59095 220 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 CTBP1Q13363 440 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 FAM160B2Q86V87 743 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ARMC8Q8IUR7 673 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 TNIP2Q8NFZ5 429 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 METTL6Q8TCB7 284 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 NOC3LQ8WTT2 800 aaKnown RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 RNF141Q8WVD5 230 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 MTFMTQ96DP5 389 aaKnown RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 APOPT1Q96IL0 206 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 FBXL18Q96ME1 805 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 HDAC8Q9BY41 377 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 PDE11AQ9HCR9 933 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 TCF7L2Q9NQB0 619 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 PNPOQ9NVS9 261 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 TAS2R3Q9NYW6 316 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 LRIG2O94898 1065 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 PSMC4P43686 418 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 CD83Q01151 205 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 KCNAB1Q14722 419 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 UBAP2Q5T6F2 1119 aaKnown RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 TRIM67Q6ZTA4 783 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 ZNF598Q86UK7 904 aaKnown RBP5.58□□□□□ -1.52
NIPBL-204ENST00000504430 MICU3Q86XE3 530 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 RAPGEF4Q8WZA2 1011 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 MAP6Q96JE9 813 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 GDAP1L1Q96MZ0 367 aa5.58□□□□□ -1.52
NIPBL-204ENST00000504430 GBP4Q96PP9 640 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms